Factsheet for VIT_14s0036g00420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34157	Soybean	cytosol	70.61	67.52
KRG92624	Soybean	cytosol	69.85	66.79
VIT_05s0049g00950.t01	Wine grape	cytosol	67.94	64.03
PGSC0003DMT400044221	Potato	cytosol, mitochondrion	67.94	63.8
PGSC0003DMT400042004	Potato	cytosol	66.41	62.59
Solyc06g053620.2.1	Tomato	cytosol	65.65	61.87
Solyc09g090090.1.1	Tomato	cytosol	66.41	61.05
GSMUA_AchrUn_...	Banana	cytosol	57.63	59.45
KRH68799	Soybean	cytosol	62.6	58.16
AT3G04530.1	Thale cress	cytosol	59.54	56.12
GSMUA_Achr2P12320_001	Banana	cytosol	62.21	56.01
CDY49329	Canola	cytosol	58.78	54.61
AT1G08650.1	Thale cress	cytosol	59.16	54.58
Bra040186.1-P	Field mustard	cytosol	58.4	54.26
GSMUA_Achr4P21890_001	Banana	cytosol	57.63	54.12
CDY64699	Canola	cytosol	58.02	53.9
CDX95043	Canola	cytosol	58.78	53.66
TraesCS6B01G413600.1	Wheat	cytosol	57.25	53.57
HORVU4Hr1G045160.2	Barley	cytosol	56.87	53.41
Bra030737.1-P	Field mustard	cytosol	57.63	53.36
CDY46740	Canola	cytosol	57.63	53.36
EES07722	Sorghum	cytosol	57.63	53.17
TraesCS6D01G360900.1	Wheat	cytosol	57.63	53.17
Zm00001d018429_P001	Maize	cytosol	58.02	53.15
CDY68533	Canola	cytosol	57.25	53.0
CDX93546	Canola	cytosol	58.02	52.96
GSMUA_Achr5P03930_001	Banana	cytosol	60.69	52.3
TraesCS6A01G375800.1	Wheat	cytosol	56.49	52.11
TraesCS6A01G375900.1	Wheat	cytosol	56.49	52.11
TraesCS6B01G413500.1	Wheat	cytosol	56.49	52.11
TraesCS6D01G360800.1	Wheat	cytosol	56.11	51.76
Os02t0807000-01	Rice	cytosol	56.11	50.87
TraesCS2A01G381600.1	Wheat	cytosol	55.34	50.35
TraesCS2B01G398900.1	Wheat	cytosol	55.73	50.34
TraesCS2D01G378100.1	Wheat	cytosol	55.34	50.17
Zm00001d003068_P001	Maize	cytosol	54.96	49.15
EES11118	Sorghum	cytosol	55.73	48.83
Os02t0625300-00	Rice	cytosol	56.49	48.52
TraesCS6A01G223500.1	Wheat	cytosol	53.44	48.28
TraesCS6B01G257800.1	Wheat	cytosol	53.05	47.93
TraesCS6D01G211900.1	Wheat	cytosol	53.05	47.93
HORVU6Hr1G067760.8	Barley	mitochondrion	34.73	47.15
HORVU6Hr1G058780.1	Barley	cytosol	53.44	46.98
Zm00001d051156_P001	Maize	cytosol	53.05	46.64
HORVU5Hr1G037500.1	Barley	plastid	44.66	46.06
EES05452	Sorghum	cytosol	53.05	45.28
GSMUA_Achr5P03940_001	Banana	cytosol	54.2	45.08
Zm00001d017270_P001	Maize	cytosol	53.05	44.69
GSMUA_Achr4P28690_001	Banana	cytosol	59.16	44.29
Os04t0517500-01	Rice	cytosol	35.5	40.09
Bra018609.1-P	Field mustard	cytosol	58.02	39.07
VIT_18s0001g07070.t01	Wine grape	cytosol	40.84	22.86
VIT_02s0025g04520.t01	Wine grape	cytosol	41.6	20.84
VIT_16s0100g00340.t01	Wine grape	mitochondrion	41.22	17.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	EntrezGene:100253505	wikigene:100253505	MapMan:18.4.5.7	EMBL:AM465699
ProteinID:CAN74792	ProteinID:CAN74792.1	ProteinID:CCB47663	ProteinID:CCB47663.1	UniProt:F6H624	EMBL:FN595241
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683
GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100253505	wikigene:LOC100253505	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC64343	UniParc:UPI0002108FF7	ArrayExpress:VIT_14s0036g00420
EnsemblPlantsGene:VIT_14s0036g00420	EnsemblPlants:VIT_14s0036g00420.t01	RefSeq:XP_002265952	RefSeq:XP_002265952.1	:	:

Description

No Description!

Coordinates

chr14:-:10040066..10041600

Molecular Weight (calculated)

29379.6 Da

IEP (calculated)

6.619

GRAVY (calculated)

-0.097

Length

262 amino acids

Sequence
(BLAST)

001: MSEALKRDYQ LCEEIGRGRF GTVFRCFSPV AEEFFACKSI NKRALSDPVD RECLEKEPKV MSLLAPHPHI LQIVGIYEDE ASLHMVMELC DSSDLFARIN
101: NQGFFHESEA ASVMKPLLEA IAHCHRNGVA HRDIKPDNVM FDSRQRLKLA DFGSAEWCGE GRGMKGVVGT PYYVAPEVLS GIEYTEKVDV WSAGVILYVM
201: LAGVPPFYGD SAAEIFEAVL RGNLRFPTRI FRTVSPAAKD LLRKMICKDV SRRLSAEQAL KI

Best Arabidopsis Sequence Match ( AT1G08650.2 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALSW FNDKVN

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.