Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G257800.1 | Wheat | cytosol | 98.62 | 98.62 |
| TraesCS6A01G223500.1 | Wheat | cytosol | 97.93 | 97.93 |
| HORVU6Hr1G058780.1 | Barley | cytosol | 91.72 | 89.26 |
| Os02t0625300-00 | Rice | cytosol | 87.24 | 82.95 |
| TraesCS2D01G378100.1 | Wheat | cytosol | 80.69 | 80.97 |
| Zm00001d051156_P001 | Maize | cytosol | 83.1 | 80.87 |
| EES05452 | Sorghum | cytosol | 85.52 | 80.78 |
| Zm00001d017270_P001 | Maize | cytosol | 83.79 | 78.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.76 | 60.24 |
| TraesCS6D01G360800.1 | Wheat | cytosol | 58.28 | 59.51 |
| TraesCS6D01G360900.1 | Wheat | cytosol | 57.93 | 59.15 |
| GSMUA_Achr2P12320_001 | Banana | cytosol | 58.97 | 58.76 |
| GSMUA_Achr5P03930_001 | Banana | cytosol | 59.31 | 56.58 |
| GSMUA_Achr4P21890_001 | Banana | cytosol | 54.14 | 56.27 |
| Solyc04g009910.2.1 | Tomato | cytosol | 51.03 | 53.43 |
| KRH34471 | Soybean | cytosol | 49.66 | 53.33 |
| VIT_14s0036g00420.t01 | Wine grape | cytosol | 47.93 | 53.05 |
| Solyc04g009900.2.1 | Tomato | cytosol | 51.03 | 53.05 |
| VIT_05s0049g00950.t01 | Wine grape | cytosol | 49.31 | 51.44 |
| PGSC0003DMT400042004 | Potato | cytosol | 48.97 | 51.08 |
| Solyc06g053620.2.1 | Tomato | cytosol | 48.97 | 51.08 |
| GSMUA_Achr5P03940_001 | Banana | cytosol | 54.48 | 50.16 |
| KRG92624 | Soybean | cytosol | 46.55 | 49.27 |
| KRH34157 | Soybean | cytosol | 46.55 | 49.27 |
| PGSC0003DMT400044221 | Potato | cytosol, mitochondrion | 47.24 | 49.1 |
| Solyc09g090090.1.1 | Tomato | cytosol | 46.55 | 47.37 |
| CDY64699 | Canola | cytosol | 45.52 | 46.81 |
| CDY68533 | Canola | cytosol | 45.52 | 46.64 |
| PGSC0003DMT400029962 | Potato | cytosol | 48.97 | 46.56 |
| AT1G08650.1 | Thale cress | cytosol | 45.52 | 46.48 |
| AT3G04530.1 | Thale cress | cytosol | 44.48 | 46.4 |
| CDY46740 | Canola | cytosol | 44.83 | 45.94 |
| Bra030737.1-P | Field mustard | cytosol | 44.83 | 45.94 |
| GSMUA_Achr4P28690_001 | Banana | cytosol | 55.17 | 45.71 |
| CDY49329 | Canola | cytosol | 44.14 | 45.39 |
| Bra040186.1-P | Field mustard | cytosol | 44.14 | 45.39 |
| Solyc05g055050.1.1 | Tomato | cytosol | 31.72 | 45.32 |
| CDX95043 | Canola | cytosol | 44.83 | 45.3 |
| CDX93546 | Canola | cytosol | 44.83 | 45.3 |
| PGSC0003DMT400060165 | Potato | mitochondrion | 44.48 | 45.1 |
| PGSC0003DMT400029874 | Potato | cytosol | 47.93 | 42.12 |
| KRH68799 | Soybean | cytosol | 40.69 | 41.84 |
| Bra018609.1-P | Field mustard | cytosol | 43.1 | 32.13 |
| TraesCS5D01G252900.1 | Wheat | nucleus | 37.59 | 28.09 |
| TraesCS7D01G052900.1 | Wheat | cytosol | 39.31 | 22.09 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:1.4.1.2 | MapMan:18.4.5.7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24349 |
| PANTHER:PTHR24349:SF136 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS6D01G211900 | EnsemblPlants:TraesCS6D01G211900.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:+:299168274..299169264
Molecular Weight (calculated)
31266.1 Da
IEP (calculated)
5.394
GRAVY (calculated)
-0.199
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MSADLNRDYE IGEEIGRGRF GVVHRCTSRS TGEAFAVKSV DRANLADDLD RELAEIEPKL AQLAGAGNPG VVQVHAVYED DTWTHMVMDL CSGPDLLDWV
101: RLRRGAPVPE PVAADIIAQL AQALALCHRR GVAHRDVKPD NVVLDVDDDG ENSSPRARLA DFGSAAWIGA DGGRAEGLVG TPHYVAPEVV SGGHYGEKAD
201: VWSAGVVMYV LLSGGALPFG GETAKDVLSA VMRGSVRFPP RLFSGVSPAA KDLMRRMMCR DEWRRFSAEQ VLRHPWIVSG GGARAMEQPT
101: RLRRGAPVPE PVAADIIAQL AQALALCHRR GVAHRDVKPD NVVLDVDDDG ENSSPRARLA DFGSAAWIGA DGGRAEGLVG TPHYVAPEVV SGGHYGEKAD
201: VWSAGVVMYV LLSGGALPFG GETAKDVLSA VMRGSVRFPP RLFSGVSPAA KDLMRRMMCR DEWRRFSAEQ VLRHPWIVSG GGARAMEQPT
001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI
Arabidopsis Description
PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.