Factsheet for PGSC0003DMT400029962

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g009900.2.1	Tomato	cytosol	85.9	93.91
PGSC0003DMT400029874	Potato	cytosol	89.84	83.03
PGSC0003DMT400060165	Potato	mitochondrion	68.85	73.43
KRH34157	Soybean	cytosol	55.74	62.04
PGSC0003DMT400044221	Potato	cytosol, mitochondrion	56.07	61.29
KRG92624	Soybean	cytosol	54.43	60.58
GSMUA_AchrUn_...	Banana	cytosol	50.16	60.24
PGSC0003DMT400042004	Potato	cytosol	54.75	60.07
TraesCS6B01G413600.1	Wheat	cytosol	50.16	54.64
AT1G08650.1	Thale cress	cytosol	50.82	54.58
Os02t0807000-01	Rice	cytosol	51.48	54.33
AT3G04530.1	Thale cress	cytosol	49.51	54.32
TraesCS6D01G360800.1	Wheat	cytosol	50.49	54.23
TraesCS6B01G413500.1	Wheat	cytosol	50.49	54.23
TraesCS6A01G375800.1	Wheat	cytosol	50.16	53.87
TraesCS6D01G360900.1	Wheat	cytosol	50.16	53.87
TraesCS6A01G375900.1	Wheat	cytosol	50.16	53.87
GSMUA_Achr4P21890_001	Banana	cytosol	48.85	53.41
HORVU4Hr1G045160.2	Barley	cytosol	48.52	53.05
Bra030737.1-P	Field mustard	cytosol	49.18	53.0
EES07722	Sorghum	cytosol	49.18	52.82
CDY68533	Canola	cytosol	48.85	52.65
CDY46740	Canola	cytosol	48.85	52.65
CDX93546	Canola	cytosol	49.51	52.61
KRH68799	Soybean	cytosol	48.52	52.48
CDY64699	Canola	cytosol	48.52	52.48
Zm00001d018429_P001	Maize	cytosol	49.18	52.45
CDX95043	Canola	cytosol	49.18	52.26
GSMUA_Achr2P12320_001	Banana	cytosol	49.51	51.89
CDY49329	Canola	cytosol	47.54	51.42
Bra040186.1-P	Field mustard	cytosol	47.54	51.42
Zm00001d003068_P001	Maize	cytosol	47.87	49.83
TraesCS2D01G378100.1	Wheat	cytosol	47.21	49.83
GSMUA_Achr5P03930_001	Banana	cytosol	49.51	49.67
EES11118	Sorghum	cytosol	48.52	49.5
TraesCS2B01G398900.1	Wheat	cytosol	46.56	48.97
TraesCS6A01G223500.1	Wheat	cytosol	46.56	48.97
TraesCS6B01G257800.1	Wheat	cytosol	46.56	48.97
TraesCS6D01G211900.1	Wheat	cytosol	46.56	48.97
TraesCS2A01G381600.1	Wheat	cytosol	45.9	48.61
HORVU6Hr1G067760.8	Barley	mitochondrion	30.49	48.19
Os02t0625300-00	Rice	cytosol	47.54	47.54
Zm00001d051156_P001	Maize	cytosol	45.9	46.98
EES05452	Sorghum	cytosol	46.89	46.58
HORVU5Hr1G037500.1	Barley	plastid	38.69	46.46
HORVU6Hr1G058780.1	Barley	cytosol	45.25	46.31
Zm00001d017270_P001	Maize	cytosol	45.9	45.02
GSMUA_Achr5P03940_001	Banana	cytosol	44.92	43.49
GSMUA_Achr4P28690_001	Banana	cytosol	49.51	43.14
Os04t0517500-01	Rice	cytosol	30.82	40.52
Bra018609.1-P	Field mustard	cytosol	50.16	39.33
PGSC0003DMT400083734	Potato	cytosol	35.41	23.63
PGSC0003DMT400004479	Potato	cytosol, plastid	35.41	23.63
PGSC0003DMT400036995	Potato	cytosol	36.39	21.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1ATL1	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400011502	PGSC:PGSC0003DMG400011502	EnsemblPlants:PGSC0003DMT400029962	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000296E074
SEG:seg	:	:	:	:	:

Description

PEP carboxylase kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400011502]

Coordinates

chr4:+:6144136..6145588

Molecular Weight (calculated)

34562.7 Da

IEP (calculated)

5.417

GRAVY (calculated)

0.014

Length

305 amino acids

Sequence
(BLAST)

001: MFQTLKNEFQ ICEEIGRGRF GTVYRCFSPA TGESFACKSI DKNLLIDSTD RECLDKEPKI LQLLSGNPNI LHLYKVYEDD DFLHMVTDFC PNSDLYERVS
101: SGSLSESAAA AILTQLVSAI SYCHHMGVAH RDIKPDNVLF DSENRLKLAD FGSAEWFAGC EGRMMSGVVG TPYYVAPEVL MGKEYNEKVD VWSAGVILYI
201: MLSGVPPFYG ETPTETFQAV LRGNLRFPTR NFRSVSSEAK DLLRKMICKD VSRRFSAEQV LSKLNFSDFH LISLSPVFFF FCKVSLFCEL LILMFFVIYR
301: TPMGD

Best Arabidopsis Sequence Match ( AT1G08650.2 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALSW FNDKVN

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.