Factsheet for TraesCS6B01G413600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G360900.1	Wheat	cytosol	96.43	95.07
TraesCS6B01G413500.1	Wheat	cytosol	93.57	92.25
TraesCS6A01G375900.1	Wheat	cytosol	93.57	92.25
HORVU4Hr1G045160.2	Barley	cytosol	87.5	87.81
Os02t0807000-01	Rice	cytosol	83.21	80.62
Zm00001d018429_P001	Maize	cytosol	79.29	77.62
EES07722	Sorghum	cytosol	77.86	76.76
HORVU6Hr1G067760.8	Barley	mitochondrion	47.86	69.43
HORVU5Hr1G037500.1	Barley	plastid	61.79	68.11
GSMUA_AchrUn_...	Banana	cytosol	57.86	63.78
TraesCS2B01G398900.1	Wheat	cytosol	62.5	60.34
GSMUA_Achr4P21890_001	Banana	cytosol	59.64	59.86
GSMUA_Achr2P12320_001	Banana	cytosol	61.07	58.76
TraesCS6B01G257800.1	Wheat	cytosol	59.64	57.59
VIT_14s0036g00420.t01	Wine grape	cytosol	53.57	57.25
Solyc04g009910.2.1	Tomato	cytosol	56.43	57.04
KRH34471	Soybean	cytosol	55.0	57.04
GSMUA_Achr5P03930_001	Banana	cytosol	61.79	56.91
Solyc04g009900.2.1	Tomato	cytosol	56.43	56.63
Solyc06g053620.2.1	Tomato	cytosol	54.64	55.04
PGSC0003DMT400042004	Potato	cytosol	54.64	55.04
VIT_05s0049g00950.t01	Wine grape	cytosol	53.57	53.96
KRH34157	Soybean	cytosol	52.5	53.65
PGSC0003DMT400044221	Potato	cytosol, mitochondrion	52.86	53.05
KRG92624	Soybean	cytosol	51.79	52.92
Solyc09g090090.1.1	Tomato	cytosol	53.21	52.28
CDY64699	Canola	cytosol	52.5	52.13
Bra040186.1-P	Field mustard	cytosol	52.14	51.77
CDY49329	Canola	cytosol	52.14	51.77
AT3G04530.1	Thale cress	cytosol	50.71	51.08
GSMUA_Achr5P03940_001	Banana	cytosol	56.79	50.48
PGSC0003DMT400060165	Potato	mitochondrion	51.43	50.35
PGSC0003DMT400029962	Potato	cytosol	54.64	50.16
CDX95043	Canola	cytosol	51.07	49.83
CDY68533	Canola	cytosol	50.36	49.82
Bra030737.1-P	Field mustard	cytosol	50.36	49.82
AT1G08650.1	Thale cress	cytosol	50.36	49.65
CDX93546	Canola	cytosol	50.36	49.13
CDY46740	Canola	cytosol	49.29	48.76
KRH68799	Soybean	cytosol	48.93	48.58
Solyc05g055050.1.1	Tomato	cytosol	34.64	47.78
GSMUA_Achr4P28690_001	Banana	cytosol	58.21	46.57
PGSC0003DMT400029874	Potato	cytosol	54.29	46.06
Bra018609.1-P	Field mustard	cytosol	48.93	35.22
TraesCS5B01G243700.1	Wheat	nucleus	41.43	25.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6B01G413600	EnsemblPlants:TraesCS6B01G413600.1	TIGR:cd05117	SEG:seg

Description

No Description!

Coordinates

chr6B:+:687083358..687084592

Molecular Weight (calculated)

29847.9 Da

IEP (calculated)

8.381

GRAVY (calculated)

0.002

Length

280 amino acids

Sequence
(BLAST)

001: MVHGGEEALR RQYAIGDEIG RGRFGTVRRC HSNATGEALA VKTTPKAPLR DALDLALVEQ EPKLHLLASS PPCSPHVVAL HAAFDDADAV HLVVDLCAGG
101: DLLSLLSARG GRLPEREAAQ LASALAACHR RGVAHRDVKP DNLLFDAATG ALKLADFGSA GWFGDGRRMT GLVGTPYYVA PEVVAGREYG KKVDVWSAGV
201: VLYVMLSGTV PFYGATAPEI FEAVLRGNLR FPPRAFAGVS PEAKDLMRRM LCKDVSRRLS AEQVLRHPWF ASCGGNAVAG

Best Arabidopsis Sequence Match ( AT3G04530.1 )
(BLAST)

001: MTREFELENN YQLCDEIGRG RFGTITRCFS PATKEFYACK TIDKRVLIDA LDRECIETEP RIMAMLPPHP NIIRIFDLYE TEDSLAIVME LVDPPMTIYD
101: RLISAGGRLS ESESASYAKQ ILSALAHCHR CDVVHRDVKP DNVLVDLVSG GVKLCDFGSA VWLGGETAEG VVGTPYYVAP EVVMGRKYDE KVDIWSAGVV
201: IYTMLAGEPP FNGETAEDIF ESILRGNLRF PPKKFGSVSS EAKDLLRKMI CRDVSRRFSA EDALRHSWMM NVGNLQSN

Arabidopsis Description

PPCK2Phosphoenolpyruvate carboxylase kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.