CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92624	Soybean	cytosol	93.43	93.43
VIT_14s0036g00420.t01	Wine grape	cytosol	67.52	70.61
KRH68799	Soybean	cytosol	68.61	66.67
VIT_05s0049g00950.t01	Wine grape	cytosol	65.69	64.75
Solyc04g009910.2.1	Tomato	cytosol	64.6	63.9
Solyc04g009900.2.1	Tomato	cytosol	64.23	63.08
KRH34471	Soybean	cytosol	59.85	60.74
Solyc05g055050.1.1	Tomato	cytosol	43.43	58.62
GSMUA_AchrUn_...	Banana	cytosol	54.01	58.27
CDX95043	Canola	cytosol	60.58	57.84
AT1G08650.1	Thale cress	cytosol	59.85	57.75
PGSC0003DMT400060165	Potato	mitochondrion	60.22	57.69
CDX93546	Canola	cytosol	59.85	57.14
AT3G04530.1	Thale cress	cytosol	57.3	56.47
CDY46740	Canola	cytosol	58.03	56.18
Bra030737.1-P	Field mustard	cytosol	57.66	55.83
PGSC0003DMT400029962	Potato	cytosol	62.04	55.74
CDY64699	Canola	cytosol	57.3	55.67
CDY68533	Canola	cytosol	57.3	55.48
Bra040186.1-P	Field mustard	cytosol	56.93	55.32
CDY49329	Canola	cytosol	56.93	55.32
GSMUA_Achr4P21890_001	Banana	cytosol	54.74	53.76
TraesCS6B01G413500.1	Wheat	cytosol	55.47	53.52
HORVU4Hr1G045160.2	Barley	cytosol	54.38	53.41
TraesCS6D01G360800.1	Wheat	cytosol	55.11	53.17
TraesCS6A01G375800.1	Wheat	cytosol	55.11	53.17
TraesCS6A01G375900.1	Wheat	cytosol	54.74	52.82
TraesCS6B01G413600.1	Wheat	cytosol	53.65	52.5
TraesCS6D01G360900.1	Wheat	cytosol	54.38	52.46
GSMUA_Achr5P03930_001	Banana	cytosol	57.66	51.97
PGSC0003DMT400029874	Potato	cytosol	62.41	51.82
Zm00001d018429_P001	Maize	cytosol	54.01	51.75
GSMUA_Achr2P12320_001	Banana	cytosol	54.74	51.55
EES07722	Sorghum	cytosol	53.28	51.41
Os02t0807000-01	Rice	cytosol	54.01	51.21
HORVU6Hr1G067760.8	Barley	mitochondrion	35.04	49.74
TraesCS2D01G378100.1	Wheat	cytosol	51.82	49.13
Zm00001d003068_P001	Maize	cytosol	52.19	48.81
TraesCS2A01G381600.1	Wheat	cytosol	51.09	48.61
TraesCS2B01G398900.1	Wheat	cytosol	51.09	48.28
EES11118	Sorghum	cytosol	52.55	48.16
Os02t0625300-00	Rice	cytosol	52.55	47.21
Zm00001d051156_P001	Maize	cytosol	51.09	46.98
TraesCS6A01G223500.1	Wheat	cytosol	49.63	46.9
TraesCS6B01G257800.1	Wheat	cytosol	49.63	46.9
TraesCS6D01G211900.1	Wheat	cytosol	49.27	46.55
HORVU5Hr1G037500.1	Barley	plastid	42.34	45.67
GSMUA_Achr5P03940_001	Banana	cytosol	52.19	45.4
EES05452	Sorghum	cytosol	50.37	44.95
HORVU6Hr1G058780.1	Barley	cytosol	48.54	44.63
Zm00001d017270_P001	Maize	cytosol	50.37	44.37
GSMUA_Achr4P28690_001	Banana	cytosol	53.28	41.71
Bra018609.1-P	Field mustard	cytosol	57.66	40.62
Os04t0517500-01	Rice	cytosol	33.21	39.22
KRH72420	Soybean	cytosol	40.15	24.77
KRH62273	Soybean	nucleus	40.88	23.98
KRH16808	Soybean	cytosol	39.05	23.94
KRH52988	Soybean	nucleus	40.15	23.55
KRH09150	Soybean	cytosol	44.16	23.36
KRH35387	Soybean	cytosol	34.67	20.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	EntrezGene:548089	ProteinID:AAN12516.1
ProteinID:AAQ82625.1	EMBL:ACUP02006582	EMBL:AY144184	EMBL:AY373033	EnsemblPlantsGene:GLYMA_10G166600	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719
EnsemblPlants:KRH34157	ProteinID:KRH34157	ProteinID:KRH34157.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q8GSL0	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000AE461

Description

hypothetical protein

Coordinates

chr10:+:40095216..40096562

Molecular Weight (calculated)

30890.1 Da

IEP (calculated)

5.811

GRAVY (calculated)

-0.104

Length

274 amino acids

Sequence
(BLAST)

001: MCTALKTNYQ LSEEIGRGRF GTIFRCFHPL SNEPYACKLI DKSLLHDSTD RDCLQNEPKF MTLLSPHPNI LQIFHVFEDD QYLSIVMDLC QPHTLFDRMV
101: DGPIQESQAA ALMKNLLEAV AHCHRLGVAH RDIKPDNILF DSADNLKLAD FGSAEWFGDG RSMSGVVGTP YYVAPEVLLG REYDEKVDVW SCGVILYIML
201: AGIPPFYGDS AAEIFEAVVR ANLRFPSRIF RTVSPAAKDL LRKMICRDSS RRFSAEQALR HPWILSAGDT AELT

Best Arabidopsis Sequence Match ( AT1G08650.1 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.