CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12680.1	KRG89812	AT2G41090.1	17360592
AT1G12680.1	KRG94975	AT2G41090.1	17360592
AT1G12680.1	KRH18664	AT2G41090.1	17360592
AT1G12680.1	KRG89812	AT5G21274.1	17360592
AT1G12680.1	KRG94975	AT5G21274.1	17360592
AT1G12680.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72420	Soybean	cytosol	93.51	94.14
KRH62273	Soybean	nucleus	71.81	68.74
KRH52988	Soybean	nucleus	70.25	67.24
CDY31273	Canola	cytosol	45.86	61.56
VIT_18s0001g07070.t01	Wine grape	cytosol	64.21	61.32
TraesCS5D01G252900.1	Wheat	nucleus	52.8	60.82
Bra016760.1-P	Field mustard	nucleus	60.4	59.21
CDY57079	Canola	cytosol	60.85	58.87
CDX98048	Canola	cytosol	60.63	58.79
CDY21060	Canola	nucleus	59.73	58.55
AT1G12680.1	Thale cress	cytosol	61.3	58.3
CDY26581	Canola	cytosol	61.52	58.02
Bra019780.1-P	Field mustard	cytosol	61.52	57.89
CDY16025	Canola	cytosol	61.3	57.81
Bra026959.1-P	Field mustard	cytosol	61.07	57.59
OQU89636	Sorghum	plastid	46.76	56.49
OQU80661	Sorghum	cytosol	37.36	56.04
PGSC0003DMT400004479	Potato	cytosol, plastid	57.05	55.8
GSMUA_Achr8P23440_001	Banana	nucleus	53.02	55.76
TraesCS5A01G246700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	55.48	55.73
CDY16526	Canola	cytosol	56.15	55.65
TraesCS5B01G243700.1	Wheat	nucleus	55.48	55.36
HORVU5Hr1G069710.1	Barley	nucleus	55.48	55.36
GSMUA_Achr3P21250_001	Banana	cytosol, nucleus, plastid	55.93	55.07
Zm00001d020776_P002	Maize	cytosol, mitochondrion, nucleus, plastid	53.69	53.69
Os09t0466900-02	Rice	plastid	54.14	53.42
GSMUA_Achr3P21240_001	Banana	cytosol	19.46	52.73
Zm00001d029398_P001	Maize	cytosol, plasma membrane, plastid	22.6	47.2
Zm00001d031844_P001	Maize	plastid	49.22	47.11
KRH34471	Soybean	cytosol	25.28	41.85
KRH34157	Soybean	cytosol	23.94	39.05
KRG92624	Soybean	cytosol	23.94	39.05
KRH68799	Soybean	cytosol	24.38	38.65
KRH09150	Soybean	cytosol	31.32	27.03
KRH35387	Soybean	cytosol	26.17	25.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100801753	MapMan:18.4.5.6	Gene3D:3.30.200.20	EMBL:ACUP02009017	EnsemblPlantsGene:GLYMA_14G179000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777
UniProt:I1MAY0	InterPro:IPR000719	EnsemblPlants:KRH16808	ProteinID:KRH16808	ProteinID:KRH16808.1	ProteinID:KRH16809.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF180
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233AFC4	SEG:seg

Description

hypothetical protein

Coordinates

chr14:+:44030814..44034325

Molecular Weight (calculated)

49076.8 Da

IEP (calculated)

8.547

GRAVY (calculated)

-0.407

Length

447 amino acids

Sequence
(BLAST)

001: MKMKKKRKES EASGWSSNLP EISKSHHSLE RRSRLNKRCR EDRGVATVPP SRGASLLLTP SRGLKRKIGC IDKATQMGRS MRIEDDYVTG GSAIGQGKFG
101: SVTVCRARAN GAEHACKTLR KGEETVHREV EIMQHVSGHP GVVTLEAVYE DDERWHLVME LCSGGRLVDR MKEGPCSEHV AAGVLKEVML VVKYCHDMGV
201: VHRDIKPENV LLTGSGKIKL ADFGLAIRIS EGQNLTGVAG SPAYVAPEVL SGRYSEKVDI WSSGVLLHAL LVGGLPFKGD SPEAVFEEIK NVKLDFQTGV
301: WESISKPARD LVGRMLTRDV SARIAADEVL RHPWILFYTE RTLKMLPFKS KLKLQNAAAS APESGLGGNK IDDDGSLDED YSSPFSSSES CNSENHEDCV
401: WIDALSTAVS RVRISETKRT KLWGPTTTSP LDQQGSSNMK TNLCKAF

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.