Factsheet for Bra016760.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12680.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G12680.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G12680.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G12680.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G12680.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21060	Canola	nucleus	97.15	97.15
Bra019780.1-P	Field mustard	cytosol	88.6	85.05
Bra026959.1-P	Field mustard	cytosol	88.38	85.02
AT1G12680.1	Thale cress	cytosol	86.18	83.62
KRH62273	Soybean	nucleus	66.67	65.1
VIT_18s0001g07070.t01	Wine grape	cytosol	66.23	64.53
KRH52988	Soybean	nucleus	65.35	63.81
KRH16808	Soybean	cytosol	59.21	60.4
KRH72420	Soybean	cytosol	58.77	60.36
TraesCS5D01G252900.1	Wheat	nucleus	51.1	60.05
PGSC0003DMT400004479	Potato	cytosol, plastid	59.21	59.08
GSMUA_Achr8P23440_001	Banana	nucleus	54.39	58.35
OQU80661	Sorghum	cytosol	37.5	57.38
TraesCS5A01G246700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	54.17	55.51
TraesCS5B01G243700.1	Wheat	nucleus	54.17	55.13
HORVU5Hr1G069710.1	Barley	nucleus	53.95	54.91
OQU89636	Sorghum	plastid	44.3	54.59
GSMUA_Achr3P21250_001	Banana	cytosol, nucleus, plastid	54.17	54.41
Os09t0466900-02	Rice	plastid	53.95	54.3
Zm00001d020776_P002	Maize	cytosol, mitochondrion, nucleus, plastid	52.19	53.24
GSMUA_Achr3P21240_001	Banana	cytosol	17.76	49.09
Zm00001d031844_P001	Maize	plastid	48.46	47.32
Zm00001d029398_P001	Maize	cytosol, plasma membrane, plastid	21.49	45.79
Bra040186.1-P	Field mustard	cytosol	23.9	38.65
Bra030737.1-P	Field mustard	cytosol	22.15	35.69
Bra026964.1-P	Field mustard	cytosol	31.58	27.85
Bra016765.1-P	Field mustard	cytosol	31.36	27.29
Bra018609.1-P	Field mustard	cytosol	21.49	25.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.6	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra016760	EnsemblPlants:Bra016760.1	EnsemblPlants:Bra016760.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4DJT2
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF180
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254603C
SEG:seg	:	:	:	:	:

Description

AT1G12680 (E=3e-197) PEPKR2 | PEPKR2 (Phosphoenolpyruvate carboxylase-related kinase 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA08:+:19839607..19841063

Molecular Weight (calculated)

50406.5 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.338

Length

456 amino acids

Sequence
(BLAST)

001: MRKKRKGSET ECSEESSCAA ASRTTNFRSH FSLEGYARLK KRCKENDSVG SFKRRLAGVA TAPPCGASSL VSSGRGLRRK IGCIDVSTQT GRKNKIDDDY
101: VFGPSIGKGN FGSVRICRSR NNGMDFACKT LKKGEETVHR EVEIMQHLSG HPLVVTLHAV YEESDCFHLV MELCSGGRLV DQMVKCSEQR AANVFKELML
201: VISYCHEMGV VHRDVKPENI LLTGGGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVTPEVI SENYSEKVDV WSAGVLLYAL LSGVLPFRGD SLDAIFEAIK
301: KVKLDFNSGV WESVSKPARD LLSRMLTRDE SARITADEVL RHPWILFYTD MTLKTMCIKS KHKGQAGPPP PCLQIRSLNL NRTNIEKKTT SDSFSNTEEE
401: EEEDESGVVD ALVVAISNVR ISEPKRIRVY SPTNIPPMEQ QHSSNLTATN TLCRAF

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.