CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12680.1	EES01631	AT2G41090.1	17360592
AT1G12680.1	EES09201	AT2G41090.1	17360592
AT1G12680.1	EES16322	AT2G41090.1	17360592
AT1G12680.1	OQU78227	AT2G41090.1	17360592
AT1G12680.1	EES01631	AT5G21274.1	17360592
AT1G12680.1	EES09201	AT5G21274.1	17360592
AT1G12680.1	EES16322	AT5G21274.1	17360592
AT1G12680.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029398_P001	Maize	cytosol, plasma membrane, plastid	60.07	83.64
Zm00001d031844_P001	Maize	plastid	92.28	58.89
CDY31273	Canola	cytosol	56.04	50.15
GSMUA_Achr3P21240_001	Banana	cytosol	24.5	44.24
OQU89636	Sorghum	plastid	54.7	44.05
GSMUA_Achr8P23440_001	Banana	nucleus	58.05	40.71
Solyc01g105670.2.1	Tomato	nucleus	58.72	39.5
GSMUA_Achr3P21250_001	Banana	cytosol, nucleus, plastid	59.4	38.99
CDY16526	Canola	cytosol	57.72	38.14
VIT_18s0001g07070.t01	Wine grape	cytosol	59.73	38.03
KRH62273	Soybean	nucleus	59.4	37.9
PGSC0003DMT400083734	Potato	cytosol	58.05	37.86
KRH72420	Soybean	cytosol	56.04	37.61
Bra016760.1-P	Field mustard	nucleus	57.38	37.5
KRH52988	Soybean	nucleus	58.72	37.47
KRH16808	Soybean	cytosol	56.04	37.36
CDY26581	Canola	cytosol	59.4	37.34
CDY21060	Canola	nucleus	57.05	37.28
PGSC0003DMT400004479	Potato	cytosol, plastid	57.05	37.2
Bra026959.1-P	Field mustard	cytosol	59.06	37.13
CDY16025	Canola	cytosol	58.72	36.92
CDX98048	Canola	cytosol	57.05	36.88
CDY57079	Canola	cytosol	56.71	36.58
Bra019780.1-P	Field mustard	cytosol	58.05	36.42
AT1G12680.1	Thale cress	cytosol	57.38	36.38
EES07722	Sorghum	cytosol	32.21	33.8
EES11118	Sorghum	cytosol	33.89	33.78
EES05452	Sorghum	cytosol	29.87	28.99
EER89106	Sorghum	cytosol	36.91	21.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.6	UniProt:A0A1Z5RB35	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU80661	ProteinID:OQU80661	ProteinID:OQU80661.1	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF180	InterPro:Prot_kinase_dom	SMART:SM00220
EnsemblPlantsGene:SORBI_3007G160600	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B8BAF81	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:59533720..59536239

Molecular Weight (calculated)

32925.4 Da

IEP (calculated)

6.350

GRAVY (calculated)

-0.141

Length

298 amino acids

Sequence
(BLAST)

001: MQHLSGHPGV VTLRAVFEDA DAFYLVMELC HGGRLLDEVA REGKLSERRA ANVIKELMAV LKYCHEMGVV HRDVKPENVL LTKAGKLKLA DFGLAVRVAD
101: GQQLIGVAGS PAYVAPEVLL GNYSQKVDIW AAGVLLHVLL MGTLPFQGNS VEAIFDAIKT VDLDFHSSQW ASVSHLARDL IGRMLTRDVS SRPDAEDVLR
201: HPWVLFYTES PQKAEFSNLW GTNKTATPMI HRERVRFDYC ESSSSESSSD NSEEQDECGI VDALATAITQ VRISEPKRSR LFSPANGLLP PSRNTLRT

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.