Factsheet for PGSC0003DMT400083734

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105670.2.1	Tomato	nucleus	93.65	96.61
TraesCS5D01G252900.1	Wheat	nucleus	52.08	61.34
GSMUA_Achr8P23440_001	Banana	nucleus	54.27	58.35
OQU80661	Sorghum	cytosol	37.86	58.05
TraesCS5A01G246700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	55.8	57.3
HORVU5Hr1G069710.1	Barley	nucleus	56.02	57.14
TraesCS5B01G243700.1	Wheat	nucleus	56.02	57.14
GSMUA_Achr3P21250_001	Banana	cytosol, nucleus, plastid	55.14	55.51
OQU89636	Sorghum	plastid	44.86	55.41
Zm00001d020776_P002	Maize	cytosol, mitochondrion, nucleus, plastid	53.39	54.59
Os09t0466900-02	Rice	plastid	53.83	54.3
PGSC0003DMT400004479	Potato	cytosol, plastid	53.17	53.17
Zm00001d031844_P001	Maize	plastid	49.02	47.97
GSMUA_Achr3P21240_001	Banana	cytosol	17.07	47.27
Zm00001d029398_P001	Maize	cytosol, plasma membrane, plastid	21.01	44.86
PGSC0003DMT400042004	Potato	cytosol	25.16	41.37
PGSC0003DMT400044221	Potato	cytosol, mitochondrion	24.07	39.43
PGSC0003DMT400060165	Potato	mitochondrion	23.41	37.41
PGSC0003DMT400029962	Potato	cytosol	23.63	35.41
PGSC0003DMT400029874	Potato	cytosol	23.63	32.73
PGSC0003DMT400036995	Potato	cytosol	29.54	26.42

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102596116	MapMan:18.4.5.6	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D722	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG401033568
PGSC:PGSC0003DMG401033568	EnsemblPlants:PGSC0003DMT400083734	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF180
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029523C5	RefSeq:XP_006351744.1
RefSeq:XP_015166123.1	RefSeq:XP_015166124.1	RefSeq:XP_015166125.1	SEG:seg	:	:

Description

Calcium-dependent protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401033568]

Coordinates

chr1:+:82307128..82311823

Molecular Weight (calculated)

50500.9 Da

IEP (calculated)

8.292

GRAVY (calculated)

-0.223

Length

457 amino acids

Sequence
(BLAST)

001: MENLGKKRKG VEISVVCQKD ESLLTVVRSH LSLEDYSQRK KKSREIVVED DSFCRKNIIT GVATAPSCGS ARSRSPGRGL KRKIGCLDSA TRLGRKKKIE
101: QDYEMGDVIG RGKFGSVLLC QRKLSGEKHA CKTLLKGEEI IHREVEIMQH LSGHPGVVTL KAVYEDAESF YLVMELCSGG RLLDQMARVG RYPEQQAANV
201: IKDLMLVIRY CHEMGVVHRD IKPENVLLTT SGQVKVSDFG LAVRISYGQS LTGVVGSPAY VAPEVLLGDY TEKVDIWSVG VLLHALLVGL LPFQGDSLES
301: IFSAIKEENL DFSGGAWESV SQPARDLLSC MMTRDVSARY SADEVLRHPW ILFYTAPTLK YHAKPIRSQL TATTRIERER RNLAFSSLSD DFGSSLTSGS
401: SSKIPEGEDS GFIDALTVAV SHMKISEPKR SRICSPARTI DQECSPNIQA NHLCTAF

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.