Factsheet for PGSC0003DMT400044221

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090090.1.1	Tomato	cytosol	94.27	92.28
PGSC0003DMT400042004	Potato	cytosol	79.57	79.86
VIT_05s0049g00950.t01	Wine grape	cytosol	73.48	73.74
VIT_14s0036g00420.t01	Wine grape	cytosol	63.8	67.94
GSMUA_AchrUn_...	Banana	cytosol	56.99	62.6
PGSC0003DMT400060165	Potato	mitochondrion	58.78	57.34
GSMUA_Achr2P12320_001	Banana	cytosol	59.5	57.04
GSMUA_Achr4P21890_001	Banana	cytosol	56.63	56.63
PGSC0003DMT400029962	Potato	cytosol	61.29	56.07
GSMUA_Achr5P03930_001	Banana	cytosol	59.14	54.28
TraesCS6B01G413600.1	Wheat	cytosol	53.05	52.86
TraesCS6B01G413500.1	Wheat	cytosol	53.76	52.82
TraesCS6A01G375800.1	Wheat	cytosol	53.41	52.46
TraesCS6D01G360800.1	Wheat	cytosol	53.05	52.11
TraesCS6A01G375900.1	Wheat	cytosol	53.05	52.11
Zm00001d018429_P001	Maize	cytosol	53.41	52.1
HORVU4Hr1G045160.2	Barley	cytosol	51.97	51.97
TraesCS6D01G360900.1	Wheat	cytosol	52.69	51.76
Os02t0807000-01	Rice	cytosol	53.41	51.56
PGSC0003DMT400029874	Potato	cytosol	60.57	51.21
EES07722	Sorghum	cytosol	51.61	50.7
TraesCS2D01G378100.1	Wheat	cytosol	51.97	50.17
EES11118	Sorghum	cytosol	53.05	49.5
TraesCS2B01G398900.1	Wheat	cytosol	50.9	48.97
TraesCS2A01G381600.1	Wheat	cytosol	50.54	48.96
Zm00001d003068_P001	Maize	cytosol	51.25	48.81
GSMUA_Achr5P03940_001	Banana	cytosol	54.12	47.94
HORVU6Hr1G067760.8	Barley	mitochondrion	32.97	47.67
Os02t0625300-00	Rice	cytosol	51.97	47.54
TraesCS6B01G257800.1	Wheat	cytosol	49.1	47.24
TraesCS6D01G211900.1	Wheat	cytosol	49.1	47.24
TraesCS6A01G223500.1	Wheat	cytosol	48.75	46.9
Zm00001d051156_P001	Maize	cytosol	48.75	45.64
EES05452	Sorghum	cytosol	49.46	44.95
HORVU6Hr1G058780.1	Barley	cytosol	47.67	44.63
GSMUA_Achr4P28690_001	Banana	cytosol	55.91	44.57
HORVU5Hr1G037500.1	Barley	plastid	39.43	43.31
Zm00001d017270_P001	Maize	cytosol	48.03	43.09
Os04t0517500-01	Rice	cytosol	32.62	39.22
PGSC0003DMT400083734	Potato	cytosol	39.43	24.07
PGSC0003DMT400004479	Potato	cytosol, plastid	38.35	23.41
PGSC0003DMT400036995	Potato	cytosol	41.58	22.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	EntrezGene:102589245	MapMan:18.4.5.7	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BFU1	PFAM:PF00069
EnsemblPlantsGene:PGSC0003DMG400017173	PGSC:PGSC0003DMG400017173	EnsemblPlants:PGSC0003DMT400044221	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294CC9E	RefSeq:XP_006354488.1	:	:

Description

Phosphoenolpyruvate carboxylase kinase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400017173]

Coordinates

chr9:-:56392082..56394193

Molecular Weight (calculated)

31488.8 Da

IEP (calculated)

5.076

GRAVY (calculated)

-0.055

Length

279 amino acids

Sequence
(BLAST)

001: MSEELKREYR VCEEIGRGRF GVVFKCYSPG TGETFAVKSI NKLLIADDSI DRQCLYNEAK IMHLVSPNPH IVRIVDVCED DTYLDIVLEL CNSSDLFHRL
101: STQRVFSESD AIAVMVPLME AIAHCHRLGV AHRDIKPDNI LFNDWNDLKL ADFGSAQCFC EGELMSGVVG TPYYVAPEVL AGRDYNEKVD IWSAGVILYI
201: MLAGIPPFYG DSTEEIFEAV LRANLRFPTR IFRSVSPAAK DLLRRMLCKD ISRRFSAEQV LRHPWITSND GTKEDGVVA

Best Arabidopsis Sequence Match ( AT1G08650.1 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.