Factsheet for VIT_05s0049g00950.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044221	Potato	cytosol, mitochondrion	73.74	73.48
PGSC0003DMT400042004	Potato	cytosol	73.38	73.38
Solyc06g053620.2.1	Tomato	cytosol	72.66	72.66
Solyc09g090090.1.1	Tomato	cytosol	74.1	72.28
VIT_14s0036g00420.t01	Wine grape	cytosol	64.03	67.94
KRH34157	Soybean	cytosol	64.75	65.69
KRG92624	Soybean	cytosol	64.39	65.33
GSMUA_AchrUn_...	Banana	cytosol	57.55	62.99
KRH68799	Soybean	cytosol	60.43	59.57
GSMUA_Achr2P12320_001	Banana	cytosol	61.87	59.11
GSMUA_Achr4P21890_001	Banana	cytosol	57.19	56.99
GSMUA_Achr5P03930_001	Banana	cytosol	60.07	54.93
AT1G08650.1	Thale cress	cytosol	55.04	53.87
TraesCS6B01G413600.1	Wheat	cytosol	53.96	53.57
TraesCS6B01G413500.1	Wheat	cytosol	54.68	53.52
TraesCS6D01G360800.1	Wheat	cytosol	54.32	53.17
TraesCS6A01G375800.1	Wheat	cytosol	54.32	53.17
Zm00001d018429_P001	Maize	cytosol	54.68	53.15
TraesCS6A01G375900.1	Wheat	cytosol	53.96	52.82
CDX93546	Canola	cytosol	54.32	52.61
TraesCS2D01G378100.1	Wheat	cytosol	54.68	52.6
Os02t0807000-01	Rice	cytosol	54.68	52.6
AT3G04530.1	Thale cress	cytosol	52.52	52.52
TraesCS6D01G360900.1	Wheat	cytosol	53.6	52.46
TraesCS2A01G381600.1	Wheat	cytosol	54.32	52.43
HORVU4Hr1G045160.2	Barley	cytosol	52.52	52.33
CDY46740	Canola	cytosol	53.24	52.3
CDY68533	Canola	cytosol	53.24	52.3
Bra030737.1-P	Field mustard	cytosol	53.24	52.3
CDY64699	Canola	cytosol	52.88	52.13
CDX95043	Canola	cytosol	53.6	51.92
CDY49329	Canola	cytosol	52.52	51.77
Bra040186.1-P	Field mustard	cytosol	52.52	51.77
EES07722	Sorghum	cytosol	52.88	51.76
TraesCS2B01G398900.1	Wheat	cytosol	53.96	51.72
Zm00001d003068_P001	Maize	cytosol	53.6	50.85
EES11118	Sorghum	cytosol	54.68	50.84
Os02t0625300-00	Rice	cytosol	54.32	49.51
TraesCS6A01G223500.1	Wheat	cytosol	51.44	49.31
TraesCS6D01G211900.1	Wheat	cytosol	51.44	49.31
TraesCS6B01G257800.1	Wheat	cytosol	51.08	48.97
HORVU6Hr1G067760.8	Barley	mitochondrion	33.09	47.67
GSMUA_Achr5P03940_001	Banana	cytosol	53.6	47.3
EES05452	Sorghum	cytosol	51.8	46.91
Zm00001d051156_P001	Maize	cytosol	50.0	46.64
Zm00001d017270_P001	Maize	cytosol	51.08	45.66
HORVU6Hr1G058780.1	Barley	cytosol	48.56	45.3
GSMUA_Achr4P28690_001	Banana	cytosol	56.83	45.14
HORVU5Hr1G037500.1	Barley	plastid	38.85	42.52
Os04t0517500-01	Rice	cytosol	31.65	37.93
Bra018609.1-P	Field mustard	cytosol	52.88	37.79
VIT_18s0001g07070.t01	Wine grape	cytosol	41.73	24.79
VIT_02s0025g04520.t01	Wine grape	cytosol	42.81	22.75
VIT_16s0100g00340.t01	Wine grape	mitochondrion	42.09	19.06

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	EntrezGene:100252772	wikigene:100252772	MapMan:18.4.5.7	Gene3D:3.30.200.20
EMBL:AM467638	ProteinID:CAN72597	ProteinID:CAN72597.1	ProteinID:CBI23638	ProteinID:CBI23638.3	UniProt:D7SZG1
EMBL:FN595496	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009931	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252772	wikigene:LOC100252772	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF244	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC65911	UniParc:UPI00015C742F
ArrayExpress:VIT_05s0049g00950	EnsemblPlantsGene:VIT_05s0049g00950	EnsemblPlants:VIT_05s0049g00950.t01	unigene:Vvi.178	RefSeq:XP_002285162	RefSeq:XP_002285162.1

Description

No Description!

Coordinates

chr5:-:7967335..7969043

Molecular Weight (calculated)

31360.5 Da

IEP (calculated)

4.904

GRAVY (calculated)

-0.069

Length

278 amino acids

Sequence
(BLAST)

001: MSEALRRDYQ VCEEIGRGRF GTVFRCISVE SGDSFACKSI DKIILADDSI DRQCIEGEAK IMHLVSGHSN VVQIFDVYED DTHLDIILEL CSSSDLFDRI
101: ADRVFSEAEA AAVMKPLMEA VAHCHRRGVA HRDIKPDNIF FDEWNRLKLG DFGSAECFRE GELMSGIVGT PYYVAPEVIA GREYSEKVDV WSAGVILYIM
201: LAGIPPFYGE SSMEIFEAVL RANLRFPARI FHSVSTAAKD LLRRMICKDV SRRFTAEQVL RHPWMTSVGE TRTEADLT

Best Arabidopsis Sequence Match ( AT1G08650.1 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.