Factsheet for VIT_16s0100g00340.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036995	Potato	cytosol	59.45	71.43
KRH09150	Soybean	cytosol	59.93	71.04
Solyc03g026340.2.1	Tomato	cytosol, nucleus	57.33	68.88
KRH35387	Soybean	cytosol	51.79	68.39
VIT_02s0025g04520.t01	Wine grape	cytosol	58.14	68.26
GSMUA_Achr1P07970_001	Banana	cytosol	50.81	63.16
GSMUA_Achr2P03300_001	Banana	cytosol	49.51	61.54
TraesCSU01G091900.1	Wheat	cytosol	47.56	56.81
TraesCS7D01G052900.1	Wheat	cytosol	47.39	56.4
Zm00001d036008_P001	Maize	cytosol, mitochondrion	45.11	56.3
EER89106	Sorghum	cytosol	46.58	56.3
TraesCS4A01G432300.1	Wheat	cytosol	47.39	56.29
VIT_05s0049g00950.t01	Wine grape	cytosol	19.06	42.09
VIT_14s0036g00420.t01	Wine grape	cytosol	17.59	41.22
VIT_18s0001g07070.t01	Wine grape	cytosol	22.64	29.7

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100257321	wikigene:100257321	MapMan:18.4.5.6	Gene3D:3.30.200.20	ProteinID:CCB56477
ProteinID:CCB56477.1	UniProt:F6HP71	EMBL:FN596000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257321
wikigene:LOC100257321	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF111	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC66934	UniParc:UPI0002107FFA	ArrayExpress:VIT_16s0100g00340	EnsemblPlantsGene:VIT_16s0100g00340	EnsemblPlants:VIT_16s0100g00340.t01	RefSeq:XP_002280303
RefSeq:XP_002280303.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr16:-:15728890..15733541

Molecular Weight (calculated)

68013.9 Da

IEP (calculated)

6.071

GRAVY (calculated)

-0.179

Length

614 amino acids

Sequence
(BLAST)

001: MFFFLRKSLT YIFCFCFGKR ERERGEQSGE RPGEPHREAL WLEGLGYSSN GLLILRRLLL FLILLFCVAL SVSQDPGDSA EIKEIWGSGC WKFGMAVAKS
101: NSSSESSTKA PHCYKVESLK ETILDTDQTS NLKDRFVLGE QLGWGQFGVI RACSDKLAGE VLACKSIAKD RLVTQDDVRS VKLEIEIMTK LSGHPNVVDL
201: KAVYEEEDYV HLVMELCAGG ELFHQLEKHG RFSEAEARVL FRHLMEVVMY CHDKGIVHRD LKPENILLAT KASSSPIKLA DFGLATYIKP GQSLYGTVGS
301: PFYIAPEVLA GGYNQAADVW SAGVILYILL SGMPPFWGKT KSRIFDAVRA ADLRFPSDPW DQLSGSAEEL IRGMLCRDPS QRLTAQEVLD HSWIRDHAQS
401: SEEPREHENQ SYEHLGEGGS SFSTFMTRNQ DISFGTGPRV ICDAQSPQFT CRSSFTSFGL EPSTPCFASG GFSFGSTDEP NTLEFSSPVP SMPSFAFFSP
501: CPITVQESYT LDLSANISTV NAIQKEASLG RLFMLSDSSV CLGHEAKDIH YKTAEVKRTG GTSGYRMSGI HKRNRTIGLG EFDQLDLVVT ESVIRWASCT
601: HLPTASSLRS SLVC

Best Arabidopsis Sequence Match ( AT1G12580.1 )
(BLAST)

001: MGMDIADKEN TSPLLFEFCN CYKVASLTET ILNPVNVSNL KDRYVLGEQL GWGQFGVIRV CSDKLTGERL ACKSISKDRL VTQDDMKSIK LEIAIMAKLA
101: GHPNVVNLKA VYEEKDSVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DSGIVHRDLK PENILMATMS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLAGG YNQAADVWSA GVILYILLSG APPFWGKTKS KIFDAVRAAD LRFSAEPWDN ITSYAKDLIR GMLCVDPSQR LSADEVLAHS
301: WMEQLSESGQ EQYDQDGFGC EGLENGGCSF STQCVSREQD YSFSVGQLEQ STDNDFKSSF STFLPADNTL PNSGFDGFSF DGKQPESTTA GFSSTGIPSM
401: PSFTFFCTSP ARTQNNDITE IDGKVRDSSP KRLLPSPDSS SQLERRDEAG ENQTEAGGKS ETRRERGNWS RMSGLHSKRN RTIGLGELDQ LVVDVAVTES
501: IIRWASCTHI PTAPSLRLSL VC

Arabidopsis Description

PEPKR1PEPKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.