CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12680.1	EES01631	AT2G41090.1	17360592
AT1G12680.1	EES09201	AT2G41090.1	17360592
AT1G12680.1	EES16322	AT2G41090.1	17360592
AT1G12680.1	OQU78227	AT2G41090.1	17360592
AT1G12680.1	EES01631	AT5G21274.1	17360592
AT1G12680.1	EES09201	AT5G21274.1	17360592
AT1G12680.1	EES16322	AT5G21274.1	17360592
AT1G12680.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020776_P002	Maize	cytosol, mitochondrion, nucleus, plastid	89.19	73.83
TraesCS5B01G243700.1	Wheat	nucleus	82.7	68.3
TraesCS5A01G246700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	81.62	67.87
HORVU5Hr1G069710.1	Barley	nucleus	81.89	67.63
TraesCS5D01G252900.1	Wheat	nucleus	70.54	67.27
Os09t0466900-02	Rice	plastid	82.16	67.11
GSMUA_Achr8P23440_001	Banana	nucleus	64.05	55.76
OQU80661	Sorghum	cytosol	44.05	54.7
GSMUA_Achr3P21250_001	Banana	cytosol, nucleus, plastid	60.54	49.34
KRH72420	Soybean	cytosol	56.49	47.07
KRH16808	Soybean	cytosol	56.49	46.76
CDY31273	Canola	cytosol	41.89	46.55
KRH62273	Soybean	nucleus	58.65	46.47
KRH52988	Soybean	nucleus	58.11	46.04
VIT_18s0001g07070.t01	Wine grape	cytosol	57.57	45.51
CDY57079	Canola	cytosol	56.22	45.02
Solyc01g105670.2.1	Tomato	nucleus	53.78	44.92
CDX98048	Canola	cytosol	55.95	44.9
PGSC0003DMT400083734	Potato	cytosol	55.41	44.86
CDY26581	Canola	cytosol	56.76	44.3
Bra016760.1-P	Field mustard	nucleus	54.59	44.3
CDY16025	Canola	cytosol	56.49	44.09
Bra026959.1-P	Field mustard	cytosol	56.49	44.09
CDY16526	Canola	cytosol	53.51	43.9
CDY21060	Canola	nucleus	54.05	43.86
AT1G12680.1	Thale cress	cytosol	55.68	43.83
Bra019780.1-P	Field mustard	cytosol	55.95	43.58
PGSC0003DMT400004479	Potato	cytosol, plastid	53.78	43.54
EES07722	Sorghum	cytosol	28.38	36.97
EES11118	Sorghum	cytosol	29.73	36.79
EES05452	Sorghum	cytosol	27.84	33.55
GSMUA_Achr3P21240_001	Banana	cytosol	11.62	26.06
EER89106	Sorghum	cytosol	33.51	24.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.6	UniProt:A0A1W0W5L3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU89636	ProteinID:OQU89636	ProteinID:OQU89636.1	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF180	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G231300	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0009DC92C0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:62283805..62287880

Molecular Weight (calculated)

39631.0 Da

IEP (calculated)

10.289

GRAVY (calculated)

-0.298

Length

370 amino acids

Sequence
(BLAST)

001: MDSLPRKRKG GARAACSLSG SRHDAPAAAR NRKRTCREPK PRPEKKKPSA SASASARGGG VVMTAPPASG SRAAPDSPGR GLKRKLGCID SATRMGRKKR
101: LESEYELGAE IGQGKFGSVR ICRARAGGGG DEFACKALPK NGEETVHREV EIMQHLSGHP GVVTLRAVFE DADRFYLVME LCGGGRLLDE IAREGKFSEQ
201: RAAIVIKDLM SVLKYCHEMG VVHRDIKPEN ILLTKAGKVK LADFGLAARV TNGQKLFGVA GSPAYVAPEV LSGSYSEKVD IWGAGVLLHV LLLGSLPFQG
301: GSLDAVFESI KTVELDFSSS PWKSISVLGR DLIGRMLNRD VSSRMTADEV LGWSPMGRVL HRMPPEGGSS

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.