Factsheet for Solyc04g009910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g009900.2.1	Tomato	cytosol	97.11	96.42
PGSC0003DMT400029874	Potato	cytosol	92.42	77.58
Solyc05g055050.1.1	Tomato	cytosol	50.54	68.97
KRH34157	Soybean	cytosol	63.9	64.6
KRG92624	Soybean	cytosol	62.45	63.14
GSMUA_AchrUn_...	Banana	cytosol	56.68	61.81
Solyc06g053620.2.1	Tomato	cytosol	59.93	59.71
Solyc09g090090.1.1	Tomato	cytosol	61.01	59.3
TraesCS6B01G413600.1	Wheat	cytosol	57.04	56.43
AT3G04530.1	Thale cress	cytosol	55.96	55.76
TraesCS6D01G360900.1	Wheat	cytosol	57.04	55.63
TraesCS6D01G360800.1	Wheat	cytosol	57.04	55.63
TraesCS6B01G413500.1	Wheat	cytosol	57.04	55.63
GSMUA_Achr4P21890_001	Banana	cytosol	55.96	55.56
Os02t0807000-01	Rice	cytosol	57.76	55.36
TraesCS6A01G375900.1	Wheat	cytosol	56.68	55.28
TraesCS6A01G375800.1	Wheat	cytosol	56.68	55.28
AT1G08650.1	Thale cress	cytosol	56.32	54.93
CDY64699	Canola	cytosol	55.6	54.61
HORVU4Hr1G045160.2	Barley	cytosol	54.87	54.48
GSMUA_Achr2P12320_001	Banana	cytosol	56.68	53.95
EES07722	Sorghum	cytosol	55.23	53.87
CDX93546	Canola	cytosol	55.6	53.66
CDY49329	Canola	cytosol	54.51	53.55
Bra040186.1-P	Field mustard	cytosol	54.51	53.55
Zm00001d018429_P001	Maize	cytosol	55.23	53.5
CDY46740	Canola	cytosol	54.51	53.36
CDX95043	Canola	cytosol	55.23	53.31
KRH68799	Soybean	cytosol	54.15	53.19
Bra030737.1-P	Field mustard	cytosol	54.15	53.0
CDY68533	Canola	cytosol	53.79	52.65
TraesCS2D01G378100.1	Wheat	cytosol	54.87	52.6
GSMUA_Achr5P03930_001	Banana	cytosol	57.4	52.3
TraesCS2B01G398900.1	Wheat	cytosol	54.15	51.72
EES11118	Sorghum	cytosol	55.6	51.51
TraesCS2A01G381600.1	Wheat	cytosol	53.43	51.39
TraesCS6D01G211900.1	Wheat	cytosol	53.43	51.03
TraesCS6B01G257800.1	Wheat	cytosol	53.43	51.03
TraesCS6A01G223500.1	Wheat	cytosol	53.43	51.03
Zm00001d003068_P001	Maize	cytosol	53.79	50.85
HORVU6Hr1G067760.8	Barley	mitochondrion	35.02	50.26
Zm00001d051156_P001	Maize	cytosol	53.07	49.33
Os02t0625300-00	Rice	cytosol	54.15	49.18
EES05452	Sorghum	cytosol	53.43	48.21
HORVU6Hr1G058780.1	Barley	cytosol	51.26	47.65
HORVU5Hr1G037500.1	Barley	plastid	42.96	46.85
Zm00001d017270_P001	Maize	cytosol	52.35	46.62
GSMUA_Achr5P03940_001	Banana	cytosol	52.71	46.35
GSMUA_Achr4P28690_001	Banana	cytosol	57.4	45.43
Os04t0517500-01	Rice	cytosol	34.66	41.38
Bra018609.1-P	Field mustard	cytosol	54.51	38.82
Solyc01g105670.2.1	Tomato	nucleus	41.52	25.96
Solyc03g026340.2.1	Tomato	cytosol, nucleus	41.52	22.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	UniProt:K4BPE6	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc04g009910.2	EnsemblPlants:Solyc04g009910.2.1	UniParc:UPI0002765C13	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:3230992..3232541

Molecular Weight (calculated)

31278.4 Da

IEP (calculated)

5.973

GRAVY (calculated)

-0.228

Length

277 amino acids

Sequence
(BLAST)

001: MFKTLKNDFQ ICEEIGRGRF GTVYRCFSPA TGESYACKSI DKNLLIDSTD RECLDKEPKI LQLLSGNPNI LHLYKVYEDD DFLHMVTDFC PNSDLYERVS
101: SGSLSESAAA AILIQLVSAI SYCHHMGVAH RDIKPDNVLF DSENRLKLAD FGSAEWFAGC DGRKMNGVVG TPYYVAPEVL MGKEYNEKVD VWSLGVILYI
201: MLSGVPPFYG ETPTETFQAV LRGNLRFPTR NFRSVSPEAK DLLRKMICKD VSRRFSAEQV LRHPWVLNGG ETRSMVD

Best Arabidopsis Sequence Match ( AT3G04530.1 )
(BLAST)

001: MTREFELENN YQLCDEIGRG RFGTITRCFS PATKEFYACK TIDKRVLIDA LDRECIETEP RIMAMLPPHP NIIRIFDLYE TEDSLAIVME LVDPPMTIYD
101: RLISAGGRLS ESESASYAKQ ILSALAHCHR CDVVHRDVKP DNVLVDLVSG GVKLCDFGSA VWLGGETAEG VVGTPYYVAP EVVMGRKYDE KVDIWSAGVV
201: IYTMLAGEPP FNGETAEDIF ESILRGNLRF PPKKFGSVSS EAKDLLRKMI CRDVSRRFSA EDALRHSWMM NVGNLQSN

Arabidopsis Description

PPCK2Phosphoenolpyruvate carboxylase kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.