CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26573	Canola	cytosol	97.85	96.91
Bra026964.1-P	Field mustard	cytosol	97.66	96.71
AT1G12580.1	Thale cress	cytosol	86.52	84.87
CDY21058	Canola	cytosol	85.74	83.78
CDY58607	Canola	cytosol	85.35	83.56
GSMUA_Achr2P03300_001	Banana	cytosol	52.73	54.66
GSMUA_Achr1P07970_001	Banana	cytosol	52.73	54.66
Zm00001d036008_P001	Maize	cytosol, mitochondrion	48.83	50.81
EER89106	Sorghum	cytosol	50.0	50.39
TraesCS4A01G432300.1	Wheat	cytosol	50.39	49.9
TraesCSU01G091900.1	Wheat	cytosol	50.0	49.81
TraesCS7D01G052900.1	Wheat	cytosol	49.8	49.42
CDY31273	Canola	cytosol	25.78	39.64
CDY49329	Canola	cytosol	21.48	39.01
CDY64699	Canola	cytosol	21.48	39.01
CDX95043	Canola	cytosol	20.7	36.93
CDY68533	Canola	cytosol	20.31	36.75
CDX93546	Canola	cytosol	20.51	36.59
CDY46740	Canola	cytosol	20.12	36.4
CDY57079	Canola	cytosol	29.69	32.9
CDY16526	Canola	cytosol	28.91	32.82
CDX98048	Canola	cytosol	29.3	32.54
CDY21060	Canola	nucleus	28.71	32.24
CDY26581	Canola	cytosol	29.49	31.86
CDY16025	Canola	cytosol	29.1	31.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.6	Gene3D:3.30.200.20	GO:A0A078FNL4	UniProt:A0A078FNL4	EnsemblPlants:CDY16015
ProteinID:CDY16015	ProteinID:CDY16015.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00090401001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF111	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EB0D2D	SEG:seg	:	:	:	:

Description

BnaC08g41080DBnaC08g41080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNL4]

Coordinates

chrLK032060:+:196296..198813

Molecular Weight (calculated)

56360.9 Da

IEP (calculated)

4.897

GRAVY (calculated)

-0.275

Length

512 amino acids

Sequence
(BLAST)

001: MGMDLADKEN TSPPLFEFCN CYKVATLTQT ILNPVNVSSL KDRYVLGEQL GLGQFGVIRV CSDKFTGEKL ACKSISKDRL VTQEDMKSIK LEIAIMAKLA
101: GHPNVVDLKA VYEEEDYVHL VMELCAGGEL FHKLEKYGRY SEVRARLLFK HLMQVVKFCH DNGIVHRDLK PENILMATVA SSSPIKLADF GLATYIKPGE
201: KLNGTVGSPF YIAPEVLSGG YNEAADVWSA GVILYILLSG VPPFWGKTKS KIFDAVRAAD LRFSAEPWGN ITSYAKDLIR GMLCVDPSQR LTADGVLAHT
301: WMDELSEPGQ EQYGQDGVGC EGLESGGCSF SIEYVSREQD YSFSMGQLEE SIDNDCRSSF SSFLPADNNN VALPTSGFGG EQLESTLPSM PSFTFFSPSP
401: ATTQNNNTHE TDEKLRDSSP KRLLPSPDSC SQPEKREEEG ESQIEAAGKT ETRRERGNWS RISGLHSKRN RTIGIGELDQ LVVDVAVTES IIRWASCTHI
501: PTAPSLTLSL VC

Best Arabidopsis Sequence Match ( AT1G12580.1 )
(BLAST)

001: MGMDIADKEN TSPLLFEFCN CYKVASLTET ILNPVNVSNL KDRYVLGEQL GWGQFGVIRV CSDKLTGERL ACKSISKDRL VTQDDMKSIK LEIAIMAKLA
101: GHPNVVNLKA VYEEKDSVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DSGIVHRDLK PENILMATMS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLAGG YNQAADVWSA GVILYILLSG APPFWGKTKS KIFDAVRAAD LRFSAEPWDN ITSYAKDLIR GMLCVDPSQR LSADEVLAHS
301: WMEQLSESGQ EQYDQDGFGC EGLENGGCSF STQCVSREQD YSFSVGQLEQ STDNDFKSSF STFLPADNTL PNSGFDGFSF DGKQPESTTA GFSSTGIPSM
401: PSFTFFCTSP ARTQNNDITE IDGKVRDSSP KRLLPSPDSS SQLERRDEAG ENQTEAGGKS ETRRERGNWS RMSGLHSKRN RTIGLGELDQ LVVDVAVTES
501: IIRWASCTHI PTAPSLRLSL VC

Arabidopsis Description

PEPKR1PEPKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.