CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016765.1-P	Field mustard	cytosol	96.56	96.37
CDY21058	Canola	cytosol	96.56	96.37
CDY26573	Canola	cytosol	85.66	86.65
AT1G12580.1	Thale cress	cytosol	86.42	86.59
CDY16015	Canola	cytosol	83.56	85.35
GSMUA_Achr2P03300_001	Banana	cytosol	52.2	55.26
GSMUA_Achr1P07970_001	Banana	cytosol	51.82	54.86
Zm00001d036008_P001	Maize	cytosol, mitochondrion	49.33	52.44
EER89106	Sorghum	cytosol	50.86	52.36
TraesCS4A01G432300.1	Wheat	cytosol	51.05	51.64
TraesCSU01G091900.1	Wheat	cytosol	50.48	51.36
TraesCS7D01G052900.1	Wheat	cytosol	50.48	51.16
CDY31273	Canola	cytosol	25.24	39.64
CDY49329	Canola	cytosol	20.84	38.65
CDY64699	Canola	cytosol	20.84	38.65
CDX95043	Canola	cytosol	20.27	36.93
CDY68533	Canola	cytosol	19.89	36.75
CDX93546	Canola	cytosol	20.08	36.59
CDY46740	Canola	cytosol	19.69	36.4
CDY57079	Canola	cytosol	29.06	32.9
CDY16526	Canola	cytosol	28.3	32.82
CDX98048	Canola	cytosol	28.68	32.54
CDY21060	Canola	nucleus	27.92	32.02
CDY26581	Canola	cytosol	28.87	31.86
CDY16025	Canola	cytosol	28.49	31.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.6	Gene3D:3.30.200.20	GO:A0A078J635	UniProt:A0A078J635	EnsemblPlants:CDY58607
ProteinID:CDY58607	ProteinID:CDY58607.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00024890001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF111	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEECD8	SEG:seg	:	:	:	:

Description

BnaCnng33360DBnaCnng33360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J635]

Coordinates

chrLK033683:-:9690..12531

Molecular Weight (calculated)

57436.9 Da

IEP (calculated)

5.092

GRAVY (calculated)

-0.286

Length

523 amino acids

Sequence
(BLAST)

001: MGMFLSDKEN TTSPLLQFRN CYKVASLTET ILNPLNVSNL RDRYFLGEQL GWGQFGVIRV CSDKLTGERL ACKSISKDRL VTQDDMKSIK LEIAIMTKLS
101: GHPHVVDLKA VYEEEDYVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DNGIVHRDLK PENILMATVS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLSGG YNEAADVWSA GVILYILLSG VPPFWGKTKS KIFDAVRAAD LRFSGEPWDR ITSHAKDLIR GMLCVDPSQR LSADDVLAHS
301: WMEEVSGSGQ EQYDEDGVGC EGLENGGCSF STGYVSREQD YSFNMGQLEP LADNDCRSSF SSFLPADNNI QTASGFGGFS FDGEQPESTS VGFSVTGLTS
401: MPSFSFFSPS SAITENNNIG ETDGKVRDTS PKRLLPSTDA SSQLERGEEG GENQTEAGGK AETRRERGNW ARMSGLHSKR NRTIGLGELD QLVVDVAVTE
501: SIIRWASCTH IPTAPSLRLS LVC

Best Arabidopsis Sequence Match ( AT1G12580.1 )
(BLAST)

001: MGMDIADKEN TSPLLFEFCN CYKVASLTET ILNPVNVSNL KDRYVLGEQL GWGQFGVIRV CSDKLTGERL ACKSISKDRL VTQDDMKSIK LEIAIMAKLA
101: GHPNVVNLKA VYEEKDSVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DSGIVHRDLK PENILMATMS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLAGG YNQAADVWSA GVILYILLSG APPFWGKTKS KIFDAVRAAD LRFSAEPWDN ITSYAKDLIR GMLCVDPSQR LSADEVLAHS
301: WMEQLSESGQ EQYDQDGFGC EGLENGGCSF STQCVSREQD YSFSVGQLEQ STDNDFKSSF STFLPADNTL PNSGFDGFSF DGKQPESTTA GFSSTGIPSM
401: PSFTFFCTSP ARTQNNDITE IDGKVRDSSP KRLLPSPDSS SQLERRDEAG ENQTEAGGKS ETRRERGNWS RMSGLHSKRN RTIGLGELDQ LVVDVAVTES
501: IIRWASCTHI PTAPSLRLSL VC

Arabidopsis Description

PEPKR1PEPKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.