Factsheet for GSMUA_Achr10P18890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10640_001	Banana	plastid	56.06	78.96
GSMUA_Achr1P21600_001	Banana	plastid	53.25	73.37
VIT_01s0026g01880.t01	Wine grape	cytosol	52.72	71.43
KRH45870	Soybean	plastid	49.91	70.65
KRH69316	Soybean	cytosol, plastid	50.62	70.07
KRH74810	Soybean	cytosol, plastid	50.62	70.07
Solyc01g010660.2.1	Tomato	plastid	51.49	69.93
PGSC0003DMT400002280	Potato	plastid	51.14	69.45
KRG99134	Soybean	plastid	50.62	69.23
HORVU4Hr1G075150.2	Barley	plastid	50.44	68.82
TraesCS4B01G287300.1	Wheat	plastid	50.62	68.41
TraesCS4A01G016800.1	Wheat	plastid	50.62	68.41
TraesCS4D01G286100.1	Wheat	plastid	50.62	68.41
Solyc05g007140.2.1	Tomato	plastid	50.26	68.1
PGSC0003DMT400065801	Potato	plastid	50.09	67.86
EER92783	Sorghum	plastid	52.02	67.43
AT2G02800.1	Thale cress	plastid	50.26	67.14
GSMUA_Achr2P07470_001	Banana	plastid	49.03	67.07
Os10t0405100-02	Rice	plasma membrane	50.26	66.82
CDY38760	Canola	plastid	46.05	66.5
CDY11655	Canola	plastid	46.05	66.5
Bra016265.1-P	Field mustard	plastid	46.05	66.5
CDY39318	Canola	cytosol, plastid	49.03	66.27
AT1G69790.1	Thale cress	plastid	44.64	65.63
Bra019654.1-P	Field mustard	cytosol, plastid	48.33	65.48
CDY45196	Canola	plastid	49.03	65.34
AT1G26970.1	Thale cress	plastid	47.28	65.29
Zm00001d048314_P001	Maize	cytosol, plastid	52.2	65.13
CDY52768	Canola	plastid	45.52	65.08
CDY49086	Canola	cytosol, plastid	47.98	65.0
Zm00001d033004_P004	Maize	plastid	49.38	64.45
EER94269	Sorghum	plastid	49.03	64.43
AT1G14370.1	Thale cress	plastid	48.15	64.32
CDY67404	Canola	plastid	50.26	64.27
CDY41675	Canola	plastid	49.74	63.74
CDY03036	Canola	plastid	49.21	63.35
CDY46426	Canola	plastid	45.52	63.17
Bra016301.1-P	Field mustard	plastid	45.52	63.17
CDY53554	Canola	plastid	47.1	62.47
CDX81634	Canola	plastid	46.92	62.24
Bra026834.1-P	Field mustard	plastid	46.75	61.86
KRH56930	Soybean	cytosol	43.41	61.75
GSMUA_Achr8P34290_001	Banana	plastid	41.3	59.49
GSMUA_Achr6P15230_001	Banana	plastid	39.89	59.42
Bra026580.1-P	Field mustard	plastid	50.26	58.61
GSMUA_Achr11P...	Banana	cytosol	37.61	57.22
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	41.65	56.83
Solyc12g077390.1.1	Tomato	cytosol	41.83	56.8
GSMUA_Achr10P...	Banana	plastid	40.77	56.17
GSMUA_Achr6P08550_001	Banana	plastid	38.31	55.9
GSMUA_Achr10P...	Banana	plastid	38.14	55.5
GSMUA_Achr8P02170_001	Banana	plastid	36.38	54.91
GSMUA_Achr10P...	Banana	plastid	39.37	53.72
GSMUA_Achr4P04920_001	Banana	plastid	35.15	51.81
GSMUA_Achr3P14810_001	Banana	plastid	36.91	50.6
GSMUA_Achr2P11330_001	Banana	cytosol	30.58	50.0
GSMUA_Achr1P18020_001	Banana	plastid	36.73	48.72
GSMUA_Achr3P26530_001	Banana	plasma membrane	33.57	47.04
GSMUA_AchrUn_...	Banana	plastid	35.85	46.9
GSMUA_Achr3P26960_001	Banana	plastid	31.28	46.72
PGSC0003DMT400049853	Potato	plasma membrane	39.02	46.06

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G18890_001
EnsemblPlants:GSMUA_Achr10P18890_001	EnsemblPlants:GSMUA_Achr10T18890_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RJG4	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002962ACD	SEG:seg

Description

Protein kinase 2B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G18890_001]

Coordinates

chr10:+:25444483..25451218

Molecular Weight (calculated)

62950.6 Da

IEP (calculated)

10.280

GRAVY (calculated)

-0.361

Length

569 amino acids

Sequence
(BLAST)

001: MNFLRKTNLK PHYILKEREL PFHHTHDLRW YLINLSKKRR RLPTPYGCHQ SNVSRPLLLC RDNSSSILTC LAVETHTPRG PPLGLCLSLR LSPSSSSRSS
101: CLCFPRGPPQ RNDWERKGTS FRSSGKVSFC CFLAGKRESM GNCVISSSRV ENAHTPRNAS YPPKVVASKR SLFSVSSSRA TFSSPSTLSV PSFSDKTSNG
201: NLSTPRTEGE ILSSSQLKAF TVNELRNATR NFRPDSLLGE GGFGYVYKGW IDEQSFSATK PGCGMVVAVK KLKPESFQGH KEWLTEVDYL GQLHHPNLVK
301: LIGYCSEGDS KLLVYEFMPK GSLENHLFRR SAQPLSWTTR IKVAIGAARG LTFLHDAESQ VIYRDFKASN ILLDSEFNAK LSDFGLAKAG PTGDRTHVST
401: QVIGTHGYAA PEYIATGRLS VKADVYSFGV VLLELLSGRR AVDKSKLGIE QNLVEWAKPC LGDKRKVFRI MDTRLEGQYP KKGALVVSML ALQCIDHEAK
501: LRPRMSHVLA SLEQLQDPKS AAFPPQADRH KTSCAISKSP TTHRHSSLHP AAAVRSPLPP IAITTGTLS

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.