Factsheet for Solyc01g010660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT1G14370.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT1G14370.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT1G14370.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT1G14370.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT1G14370.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT1G14370.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT1G14370.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT1G14370.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT1G14370.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002280	Potato	plastid	98.09	98.09
Solyc05g007140.2.1	Tomato	plastid	84.49	84.29
VIT_01s0026g01880.t01	Wine grape	cytosol	79.0	78.81
KRH74810	Soybean	cytosol, plastid	76.85	78.35
KRH69316	Soybean	cytosol, plastid	76.85	78.35
KRH45870	Soybean	plastid	72.79	75.87
AT2G02800.1	Thale cress	plastid	73.99	72.77
KRG99134	Soybean	plastid	72.08	72.6
CDY45196	Canola	plastid	73.51	72.13
Bra019654.1-P	Field mustard	cytosol, plastid	72.08	71.9
CDY39318	Canola	cytosol, plastid	72.08	71.73
CDY49086	Canola	cytosol, plastid	71.6	71.43
CDY67404	Canola	plastid	74.22	69.89
CDY41675	Canola	plastid	73.99	69.82
CDY53554	Canola	plastid	71.36	69.7
CDX81634	Canola	plastid	71.12	69.46
CDY03036	Canola	plastid	73.27	69.46
Bra026834.1-P	Field mustard	plastid	70.88	69.07
AT1G14370.1	Thale cress	plastid	70.17	69.01
GSMUA_Achr1P21600_001	Banana	plastid	66.59	67.55
HORVU4Hr1G075150.2	Barley	plastid	66.11	66.43
TraesCS4A01G016800.1	Wheat	plastid	66.59	66.27
TraesCS4B01G287300.1	Wheat	plastid	66.59	66.27
TraesCS4D01G286100.1	Wheat	plastid	66.59	66.27
GSMUA_Achr2P07470_001	Banana	plastid	64.92	65.38
Os10t0405100-02	Rice	plasma membrane	66.35	64.95
EER94269	Sorghum	plastid	66.35	64.2
EER92783	Sorghum	plastid	66.83	63.78
Bra026580.1-P	Field mustard	plastid	74.22	63.73
Zm00001d033004_P004	Maize	plastid	66.11	63.53
GSMUA_Achr6P10640_001	Banana	plastid	59.19	61.39
Zm00001d048314_P001	Maize	cytosol, plastid	66.59	61.18
Solyc06g005500.2.1	Tomato	nucleus	58.47	60.2
Solyc01g008870.1.1	Tomato	plastid	53.46	59.73
Solyc10g084770.1.1	Tomato	cytosol, plastid	57.76	58.6
Solyc12g077390.1.1	Tomato	cytosol	58.23	58.23
Solyc04g011520.2.1	Tomato	nucleus	54.42	57.87
Solyc11g062400.1.1	Tomato	plastid	54.18	57.32
Solyc05g053930.2.1	Tomato	plastid	54.89	56.23
Solyc09g010850.2.1	Tomato	cytosol, plastid	55.13	55.53
GSMUA_Achr10P...	Banana	cytosol	69.93	51.49
Solyc03g032150.2.1	Tomato	plastid	49.88	50.0
Solyc07g007980.2.1	Tomato	nucleus	52.27	49.77
Solyc01g008860.1.1	Tomato	plastid	48.69	49.76
Solyc01g112220.2.1	Tomato	plastid	48.69	49.76
Solyc05g007050.2.1	Tomato	cytosol	54.89	48.12
Solyc04g082500.2.1	Tomato	nucleus	47.02	47.7
Solyc02g087830.2.1	Tomato	plastid	45.82	47.06
Solyc01g010780.2.1	Tomato	cytosol	53.7	46.78

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4ATQ9	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc01g010660.2	EnsemblPlants:Solyc01g010660.2.1	UniParc:UPI0002761CF6	SEG:seg

Description

No Description!

Coordinates

chr1:+:5673997..5680626

Molecular Weight (calculated)

45926.0 Da

IEP (calculated)

10.298

GRAVY (calculated)

-0.345

Length

419 amino acids

Sequence
(BLAST)

001: MGNCLGSSAR VDATLSSHNI SASGASRIPS RTSHSSVLSS LSIPSYSRKS SADTLSTPRS EGEILFSPNV KSFSFNELKS ATRNFRPDSL LGEGGFGYVF
101: KGWIDEHTLT AAKPGSGMVI AVKKLKPEGF QGHKEWVTEV NYLGQLRHPN LVKLIGYCIE GDDRLLVYEF MPKGSLENHL FRRGPQPLTW LTRIKVAIGA
201: ARGLAFLHDA KEQVIYRDFK ASNILLDGEF NAKLSDFGLA KAGPTGDRTH VSTQVIGTQG YAAPEYVATG RLTSKSDVYS FGVVLLELLS GRRALDKMKV
301: GVEQNLVDWA KPYLGDKRRL FRIMDTKLEG QYPQKGAYTA ANLAWQCLSN EPKLRPRMSE VLAALEQLQA PKGVNKISQI EHRATSSSVP ASPFKHRSSL
401: SVTPSASPLK AYHKSPRGR

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.