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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX92401
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G14370.1 CDX73678 AT3G51920.1 17360592
AT1G14370.1 CDX95314 AT3G51920.1 17360592
AT1G14370.1 CDY23174 AT3G51920.1 17360592
AT1G14370.1 CDX92401 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53554 Canola plastid 99.77 99.77
Bra026834.1-P Field mustard plastid 98.83 98.6
CDY49086 Canola cytosol, plastid 89.04 90.95
CDY39318 Canola cytosol, plastid 88.34 90.02
AT1G14370.1 Thale cress plastid 87.88 88.5
CDY45196 Canola plastid 80.42 80.8
CDY41675 Canola plastid 81.82 79.05
CDY67404 Canola plastid 81.35 78.43
CDY03036 Canola plastid 80.65 78.28
VIT_01s0026g01880.t01 Wine grape cytosol 73.43 75.0
KRH69316 Soybean cytosol, plastid 71.33 74.45
KRH74810 Soybean cytosol, plastid 71.33 74.45
KRH45870 Soybean plastid 69.23 73.88
PGSC0003DMT400065801 Potato plastid 70.16 71.67
KRG99134 Soybean plastid 69.46 71.63
PGSC0003DMT400002280 Potato plastid 69.7 71.36
Solyc01g010660.2.1 Tomato plastid 69.46 71.12
Solyc05g007140.2.1 Tomato plastid 69.46 70.95
CDY38760 Canola plastid 61.77 67.26
CDY11655 Canola plastid 61.54 67.01
HORVU4Hr1G075150.2 Barley plastid 65.03 66.91
TraesCS4A01G016800.1 Wheat plastid 65.5 66.75
TraesCS4B01G287300.1 Wheat plastid 65.5 66.75
TraesCS4D01G286100.1 Wheat plastid 65.5 66.75
GSMUA_Achr1P21600_001 Banana plastid 63.17 65.62
EER92783 Sorghum plastid 66.2 64.69
CDY52768 Canola plastid 59.91 64.57
CDY46426 Canola plastid 60.37 63.17
Os10t0405100-02 Rice plasma membrane 62.7 62.85
GSMUA_Achr2P07470_001 Banana plastid 60.14 62.02
Zm00001d048314_P001 Maize cytosol, plastid 65.73 61.84
EER94269 Sorghum plastid 62.24 61.66
Zm00001d033004_P004 Maize plastid 61.31 60.32
GSMUA_Achr6P10640_001 Banana plastid 55.71 59.16
CDY10453 Canola plastid 53.38 58.72
CDY48100 Canola plastid 52.91 58.51
CDY40347 Canola plastid 53.15 58.46
CDY04848 Canola plastid 52.45 57.99
CDX76093 Canola cytosol, plastid 47.09 57.71
CDY02940 Canola cytosol 47.09 57.71
CDY06271 Canola plastid 54.55 57.64
CDX95143 Canola plastid 54.78 57.6
CDY06715 Canola plastid 54.78 57.6
CDY09904 Canola plastid 54.31 57.39
CDX80814 Canola plastid 51.52 56.52
CDY55560 Canola plastid 51.52 56.52
CDY39519 Canola cytosol 51.75 56.06
CDY31741 Canola cytosol, plastid 53.61 55.02
CDX77220 Canola cytosol, plastid 53.61 55.02
CDY47885 Canola plastid 52.91 54.96
CDX83305 Canola plastid 50.82 53.96
CDY07022 Canola plastid 47.55 53.54
CDX95754 Canola plastid 50.35 53.47
CDY24954 Canola plastid 48.95 53.44
CDY07643 Canola plastid 48.72 53.18
CDX74847 Canola cytosol 47.32 53.14
CDY40221 Canola plastid 47.55 53.12
CDY20465 Canola cytosol 47.55 52.85
CDX93249 Canola plastid 47.09 52.74
CDY47489 Canola plastid 47.09 49.03
CDY26797 Canola plastid 46.85 48.32
CDY31372 Canola plastid 46.15 48.29
CDY40618 Canola plastid 43.59 48.07
CDX71350 Canola plastid 45.69 47.8
CDX72550 Canola plastid 43.12 47.19
GSMUA_Achr10P... Banana cytosol 62.24 46.92
CDY24816 Canola cytosol, plastid 38.69 45.23
CDY47249 Canola cytosol 49.65 45.22
CDX69153 Canola plastid 45.22 45.12
CDY24815 Canola plastid 44.29 45.02
CDX75515 Canola plastid 44.76 44.96
CDY04026 Canola cytosol 49.65 44.94
CDY41645 Canola plastid 43.82 44.55
CDY49042 Canola cytosol 50.12 44.51
CDY59664 Canola cytosol 49.65 44.47
CDX72549 Canola plastid 44.76 44.14
CDY37534 Canola nucleus 50.12 44.06
CDX78606 Canola nucleus 51.28 43.65
CDY28689 Canola nucleus 49.42 43.53
CDX70589 Canola nucleus 51.05 43.45
CDY40619 Canola plastid 44.06 43.45
CDX85943 Canola plastid 43.82 42.82
CDX68102 Canola plastid 43.36 41.99
CDX87609 Canola cytosol 43.82 41.87
CDX88265 Canola cytosol 43.36 41.7
CDY00122 Canola cytosol 48.72 28.44
CDY65043 Canola cytosol 50.58 13.73
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078D086EnsemblPlants:CDX81634ProteinID:CDX81634
ProteinID:CDX81634.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00136547001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF07714PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF160InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE7249SEG:seg::::
Description
BnaC08g39670D
Coordinates
chrLK031826:+:102572..104901
Molecular Weight (calculated)
46126.8 Da
IEP (calculated)
10.050
GRAVY (calculated)
-0.394
Length
429 amino acids
Sequence
(BLAST)
001: MGNCLDSSAK VDSSSHSPHA NSGSSASNVS SNTSRSTGPS GRSTNSYSTG SSSLGSSLPT QPRTEGEILS SPNLKAFSFN ELKNATKNFR PDSLLGEGGF
101: GRVFKGWIDE TTLTASRPGS GIVVAVKKLK PEGFQGHKEW LTEVNYLGQL SHPNLVLLVG YCLEGENRLL VYEFMPKGSL ENHLFRRGAQ PLTWAIRMKV
201: AVGAAKGLNF LHEAKSQVIY RDFKAANILL DAEFNAKLSD FGLAKAGPTG DNTHVTTKVM GTQGYAAPEY IATGLLTAKS DVYSFGVVLL ELISGRRPMD
301: NSNGGVEYSL VDWAKPYLDD KRKLFRIMDT KLGGQYPQKG ALAAASLALQ CLNPDAKLRP KMSEVLVTLE QLESAAKPGG KHTQMESPRG RHSSGVQKSS
401: VRFGQDRPLG NITPGASPLP SYSKSPRVR
Best Arabidopsis Sequence Match ( AT1G14370.1 )
(BLAST)
001: MGNCLDSSAK VDNSNHSPHA NSASSGSKVS SKTSRSTGPS GLSTTSYSTD SSFGPLPTLR TEGEILSSPN LKAFTFNELK NATKNFRQDN LLGEGGFGCV
101: FKGWIDQTSL TASRPGSGIV VAVKQLKPEG FQGHKEWLTE VNYLGQLSHP NLVLLVGYCA EGENRLLVYE FMPKGSLENH LFRRGAQPLT WAIRMKVAVG
201: AAKGLTFLHE AKSQVIYRDF KAANILLDAD FNAKLSDFGL AKAGPTGDNT HVSTKVIGTH GYAAPEYVAT GRLTAKSDVY SFGVVLLELI SGRRAMDNSN
301: GGNEYSLVDW ATPYLGDKRK LFRIMDTKLG GQYPQKGAFT AANLALQCLN PDAKLRPKMS EVLVTLEQLE SVAKPGTKHT QMESPRFHHS SVMQKSPVRY
401: SHDRPLLHMT PGASPLPSYT QSPRVR
Arabidopsis Description
PBL2PBL2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI52]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.