CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04848	Canola	plastid	98.97	98.97
CDY10453	Canola	plastid	91.49	91.03
CDY40347	Canola	plastid	90.98	90.51
AT5G02290.1	Thale cress	plastid	90.46	90.23
CDX80814	Canola	plastid	88.92	88.24
CDY55560	Canola	plastid	88.14	87.47
CDY09904	Canola	plastid	64.95	62.07
CDY06271	Canola	plastid	64.95	62.07
CDX95143	Canola	plastid	65.21	62.01
CDY06715	Canola	plastid	65.21	62.01
CDY47885	Canola	plastid	65.21	61.26
CDY39519	Canola	cytosol	62.11	60.86
CDX77220	Canola	cytosol, plastid	65.46	60.77
CDY31741	Canola	cytosol, plastid	65.46	60.77
CDX76093	Canola	cytosol, plastid	53.35	59.14
CDY02940	Canola	cytosol	53.35	59.14
CDY07022	Canola	plastid	57.47	58.53
CDX83305	Canola	plastid	60.82	58.42
CDX95754	Canola	plastid	60.57	58.17
CDX93249	Canola	plastid	56.96	57.7
CDY40221	Canola	plastid	56.19	56.77
CDY07643	Canola	plastid	56.96	56.23
CDX74847	Canola	cytosol	55.15	56.02
CDY24954	Canola	plastid	56.7	55.98
CDY20465	Canola	cytosol	54.38	54.66
CDY53554	Canola	plastid	58.76	53.15
CDX81634	Canola	plastid	58.51	52.91
CDY49086	Canola	cytosol, plastid	57.22	52.86
CDY11655	Canola	plastid	53.35	52.54
CDY38760	Canola	plastid	53.09	52.28
CDY39318	Canola	cytosol, plastid	56.44	52.02
CDY52768	Canola	plastid	52.84	51.51
CDY45196	Canola	plastid	56.44	51.29
CDY41675	Canola	plastid	57.47	50.23
CDY46426	Canola	plastid	52.84	50.0
CDY67404	Canola	plastid	57.22	49.89
CDY03036	Canola	plastid	56.44	49.55
CDY31372	Canola	plastid	51.03	48.29
CDY47489	Canola	plastid	51.03	48.06
CDX71350	Canola	plastid	50.77	48.05
CDY26797	Canola	plastid	51.03	47.6
CDY40618	Canola	plastid	46.91	46.79
CDY24815	Canola	plastid	48.71	44.79
CDY41645	Canola	plastid	48.71	44.79
CDX72550	Canola	plastid	45.1	44.64
CDX75515	Canola	plastid	48.71	44.26
CDX69153	Canola	plastid	48.97	44.19
CDY24816	Canola	cytosol, plastid	41.49	43.87
CDX72549	Canola	plastid	48.97	43.68
CDY49042	Canola	cytosol	54.12	43.48
CDX87609	Canola	cytosol	50.26	43.43
CDY40619	Canola	plastid	48.45	43.22
CDY59664	Canola	cytosol	53.35	43.22
CDX88265	Canola	cytosol	49.48	43.05
CDY37534	Canola	nucleus	54.12	43.03
CDY28689	Canola	nucleus	53.87	42.92
CDY47249	Canola	cytosol	52.06	42.89
CDY04026	Canola	cytosol	51.8	42.41
CDX85943	Canola	plastid	47.68	42.14
CDX78606	Canola	nucleus	54.38	41.87
CDX68102	Canola	plastid	47.68	41.76
CDX70589	Canola	nucleus	53.87	41.47
CDY00122	Canola	cytosol	52.84	27.89
CDY65043	Canola	cytosol	54.12	13.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:A0A078IB51	UniProt:A0A078IB51
EnsemblPlants:CDY48100	ProteinID:CDY48100	ProteinID:CDY48100.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00088794001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF276	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EC6090	:	:

Description

BnaC02g03570DBnaC02g03570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB51]

Coordinates

chrLK032754:+:28610..30774

Molecular Weight (calculated)

43373.9 Da

IEP (calculated)

9.625

GRAVY (calculated)

-0.404

Length

388 amino acids

Sequence
(BLAST)

001: MGACFSNQIR TDIASSTWLS SKFLSRDGSK GSSTTSFSHM PRTEGEILQN ANLKNFSLSE LKSATRNFRP DSMVGEGGFG RVFKGWIDET SLAPSKPGNG
101: IVIAVKRLNQ EGLQGHREWL AEINYLGQLD HPNLVKLIGY CLDEEQRLLV YEFMPRGSLE NHLFRKGTFF QPLSWSTRVR MALGAARGLA FLHNAQPQVI
201: YRDFKASNIL LDSNYNAKLS DFGLARDGPM GDISHVTTRV VGTQGYAAPE YLATGHLSAK SDVYSFGVVL LELLSGRRAI DKNQPVGEHN LVEWARPYLT
301: NKRRLLRVMD PRLQGQYSLT QALKIAGLAL DCITIDYKVR PNMNEIVKTL EELHVPKETP KEQQSLQPSS DNNNKSPQAV NYPRPSIM

Best Arabidopsis Sequence Match ( AT5G02290.2 )
(BLAST)

001: MGGCFSNRIK TDIASSTWLS SKFLSRDGSK GSSTASFSYM PRTEGEILQN ANLKNFSLSE LKSATRNFRP DSVVGEGGFG CVFKGWIDES SLAPSKPGTG
101: IVIAVKRLNQ EGFQGHREWL AEINYLGQLD HPNLVKLIGY CLEEEHRLLV YEFMTRGSLE NHLFRRGTFY QPLSWNTRVR MALGAARGLA FLHNAQPQVI
201: YRDFKASNIL LDSNYNAKLS DFGLARDGPM GDNSHVSTRV MGTQGYAAPE YLATGHLSVK SDVYSFGVVL LELLSGRRAI DKNQPVGEHN LVDWARPYLT
301: NKRRLLRVMD PRLQGQYSLT RALKIAVLAL DCISIDAKSR PTMNEIVKTM EELHIQKEAS KEQQNPQISI DNIINKSPQA VNYPRPSIM

Arabidopsis Description

PBL11Probable serine/threonine-protein kinase PBL11 [Source:UniProtKB/Swiss-Prot;Acc:P43293]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.