CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47489	Canola	plastid	98.56	99.51
Bra037280.1-P	Field mustard	plastid	95.67	97.07
CDY31372	Canola	plastid	90.14	91.46
CDX71350	Canola	plastid	89.9	91.22
AT2G17220.1	Thale cress	plastid	86.06	86.47
KRH74099	Soybean	plastid	66.11	66.75
KRH14015	Soybean	plastid	65.87	66.5
Solyc01g112220.2.1	Tomato	plastid	65.14	66.1
PGSC0003DMT400038068	Potato	plastid	64.66	64.35
VIT_03s0038g03800.t01	Wine grape	plastid	65.38	63.85
GSMUA_Achr4P04920_001	Banana	plastid	56.49	60.88
GSMUA_Achr3P14810_001	Banana	plastid	59.38	59.52
TraesCS7B01G473700.1	Wheat	plastid	57.21	57.77
Zm00001d054014_P002	Maize	cytosol, plastid	59.62	57.67
Os02t0118200-01	Rice	plasma membrane	59.13	57.61
Os06t0727400-01	Rice	plasma membrane	56.97	57.25
GSMUA_Achr1P18020_001	Banana	plastid	58.89	57.11
TraesCS2D01G038200.1	Wheat	cytosol	53.37	57.07
TraesCSU01G105900.1	Wheat	plastid	56.73	56.73
HORVU6Hr1G010050.1	Barley	plastid	59.38	56.65
TraesCS6B01G069800.1	Wheat	plastid	59.38	56.65
TraesCSU01G111800.1	Wheat	plastid	59.38	56.65
TraesCS7A01G550300.1	Wheat	plastid	56.49	56.49
EES04370	Sorghum	plastid	59.13	56.42
TraesCS6A01G052100.2	Wheat	plastid	58.89	56.32
EER95575	Sorghum	cytosol	51.92	55.38
GSMUA_Achr3P26960_001	Banana	plastid	50.72	55.38
EER90433	Sorghum	plastid	55.29	54.89
Zm00001d014850_P002	Maize	plastid	53.85	54.24
Zm00001d015012_P001	Maize	plastid	58.65	53.86
TraesCS2A01G039600.1	Wheat	cytosol	54.09	53.32
TraesCS2A01G404600.1	Wheat	cytosol	58.17	52.95
TraesCS2D01G401500.2	Wheat	cytosol	58.17	52.95
Zm00001d048342_P001	Maize	plastid	51.92	52.94
TraesCS2B01G422500.1	Wheat	cytosol	57.45	52.76
KXG26902	Sorghum	cytosol	58.17	52.49
Zm00001d026126_P001	Maize	plastid	57.45	52.41
GSMUA_Achr2P11330_001	Banana	cytosol	43.27	51.72
HORVU6Hr1G009900.9	Barley	mitochondrion	41.59	51.64
TraesCS6D01G235300.1	Wheat	cytosol	54.33	51.6
CDY06715	Canola	plastid	50.24	51.23
CDY40618	Canola	plastid	47.84	51.16
CDY48100	Canola	plastid	47.6	51.03
CDX95143	Canola	plastid	50.0	50.98
CDY04848	Canola	plastid	47.36	50.77
CDY40347	Canola	plastid	47.6	50.77
CDY39519	Canola	cytosol	48.32	50.76
CDY09904	Canola	plastid	49.52	50.74
CDY47885	Canola	plastid	50.24	50.61
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	50.96	50.6
CDX76093	Canola	cytosol, plastid	42.55	50.57
CDY02940	Canola	cytosol	42.55	50.57
CDY10453	Canola	plastid	47.36	50.51
CDX72550	Canola	plastid	47.6	50.51
CDY06271	Canola	plastid	49.04	50.25
Os02t0670100-00	Rice	cytosol, plasma membrane	55.77	50.22
CDY55560	Canola	plastid	47.12	50.13
TraesCS6A01G253700.1	Wheat	cytosol	54.33	49.89
CDX80814	Canola	plastid	46.88	49.87
TraesCS6A01G051600.1	Wheat	cytosol	44.71	49.6
HORVU6Hr1G064690.4	Barley	cytosol	54.33	49.56
TraesCS6B01G271700.1	Wheat	cytosol	54.57	49.35
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	44.23	49.07
CDX77220	Canola	cytosol, plastid	49.28	49.04
CDY31741	Canola	cytosol, plastid	49.28	49.04
Os04t0563900-00	Rice	plasma membrane	55.77	48.84
CDX83305	Canola	plastid	47.36	48.76
CDY40221	Canola	plastid	44.95	48.7
TraesCS6B01G069300.1	Wheat	cytosol	43.99	48.67
CDX93249	Canola	plastid	44.71	48.56
CDY07022	Canola	plastid	44.47	48.56
CDX95754	Canola	plastid	47.12	48.51
CDY11655	Canola	plastid	45.91	48.48
CDY38760	Canola	plastid	45.91	48.48
CDY24816	Canola	cytosol, plastid	42.55	48.23
EES05745	Sorghum	cytosol	54.81	48.2
CDX74847	Canola	cytosol	44.23	48.17
CDX75515	Canola	plastid	49.28	48.01
CDX69153	Canola	plastid	49.52	47.91
CDY24815	Canola	plastid	48.56	47.87
CDY41645	Canola	plastid	48.56	47.87
Zm00001d027509_P002	Maize	cytosol	43.03	47.73
CDY20465	Canola	cytosol	44.23	47.67
TraesCSU01G110700.2	Wheat	cytosol	43.03	47.61
CDY07643	Canola	plastid	44.95	47.58
CDY24954	Canola	plastid	44.95	47.58
HORVU7Hr1G121690.5	Barley	plastid	56.49	47.28
CDX85943	Canola	plastid	49.76	47.15
CDY49086	Canola	cytosol, plastid	47.6	47.14
CDY53554	Canola	plastid	48.56	47.09
Zm00001d051424_P001	Maize	plastid	50.48	47.09
CDY39318	Canola	cytosol, plastid	47.6	47.03
CDX68102	Canola	plastid	50.0	46.95
CDY40619	Canola	plastid	49.04	46.9
CDX81634	Canola	plastid	48.32	46.85
TraesCS2B01G052500.1	Wheat	cytosol	51.92	46.75
CDX72549	Canola	plastid	48.8	46.67
CDY45196	Canola	plastid	47.84	46.6
CDX87609	Canola	cytosol	49.76	46.1
CDX88265	Canola	cytosol	49.04	45.74
CDY52768	Canola	plastid	43.75	45.73
CDY03036	Canola	plastid	48.08	45.25
CDY41675	Canola	plastid	47.84	44.82
CDY67404	Canola	plastid	47.84	44.72
CDY46426	Canola	plastid	43.75	44.39
CDY47249	Canola	cytosol	45.91	40.55
CDY04026	Canola	cytosol	45.43	39.87
CDY49042	Canola	cytosol	45.91	39.54
CDY37534	Canola	nucleus	45.91	39.14
CDY59664	Canola	cytosol	44.47	38.62
CDX78606	Canola	nucleus	46.63	38.49
CDY28689	Canola	nucleus	44.95	38.4
CDX70589	Canola	nucleus	46.15	38.1
CDY00122	Canola	cytosol	45.19	25.58
CDY65043	Canola	cytosol	45.19	11.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078GNN2	UniProt:A0A078GNN2	EnsemblPlants:CDY26797
ProteinID:CDY26797	ProteinID:CDY26797.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00035734001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDCE28	SEG:seg	:	:

Description

BnaC09g09240DBnaC09g09240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNN2]

Coordinates

chrLK032194:-:288509..290670

Molecular Weight (calculated)

45872.5 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.410

Length

416 amino acids

Sequence
(BLAST)

001: MGLCWSSSPS RSPSTTTTTT TTTPASTGNI SSGPFKSTTT GTSRSTISNF SGFSAASGED AYPEGQILPN PNLRIFSLAE LRASTRNFKS ENVLGEGGFG
101: KVFKGWLEEK GPGSHSSTGT VIAVKKLNSE SFQGFEEWQC EVNFLGRISH PNLVKLLGYC LEGDDLLLVY EYMQKGSLEN HLFRKGSVVQ PLSWEIRLKI
201: AIGAAKGLAF LHASEKQVIY RDFKASNILL DASYNAKLSD FGLAKLGPSA SQSHITTRVM GTQGYAAPEY VATGHLYVKS DNYGFGVVLA EILTGLRAVD
301: PLRPTGQQNL TDWIKPHLSE RRKLRRIMDP RLEGKYPFKS AFRVAQLALK CLEPEQKNRP SMKEVVESLE LVVAANEKPL ERRTARDSPS VGHQQSHYRR
401: EHLTSFQPRQ TVARAH

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.