CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048342_P001	Maize	plastid	93.33	89.22
Zm00001d027509_P002	Maize	cytosol	75.64	78.67
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	74.1	68.97
KRH07892	Soybean	cytosol	45.38	67.82
GSMUA_Achr4P04920_001	Banana	plastid	62.56	63.21
GSMUA_Achr1P18020_001	Banana	plastid	67.69	61.54
KRH28911	Soybean	plastid	57.44	61.2
GSMUA_Achr3P14810_001	Banana	plastid	64.62	60.72
VIT_04s0044g00050.t01	Wine grape	plastid	45.38	58.22
EER90433	Sorghum	plastid	62.31	58.0
KRH39445	Soybean	plastid	58.97	57.93
GSMUA_Achr3P26960_001	Banana	plastid	55.38	56.69
PGSC0003DMT400045075	Potato	plastid	60.0	56.39
PGSC0003DMT400048049	Potato	plastid	58.97	55.56
KXG26902	Sorghum	cytosol	65.64	55.53
KRH14015	Soybean	plastid	58.46	55.34
KRH28912	Soybean	plastid	57.44	55.31
EES04370	Sorghum	plastid	61.54	55.05
KRH60921	Soybean	cytosol	52.05	54.86
Solyc01g112220.2.1	Tomato	plastid	57.44	54.63
KRH74099	Soybean	plastid	57.69	54.61
Solyc03g032150.2.1	Tomato	plastid	58.46	54.55
KRH51603	Soybean	mitochondrion, plastid	51.03	53.93
AT2G17220.1	Thale cress	plastid	57.18	53.86
PGSC0003DMT400038068	Potato	plastid	57.69	53.83
CDY31372	Canola	plastid	56.41	53.66
Bra002031.1-P	Field mustard	plastid	56.41	53.66
CDX71350	Canola	plastid	56.15	53.41
VIT_03s0038g03800.t01	Wine grape	plastid	58.21	53.29
VIT_18s0122g01270.t01	Wine grape	plastid	56.92	53.11
EES05745	Sorghum	cytosol	63.59	52.43
CDY47489	Canola	plastid	55.38	52.43
Solyc04g082500.2.1	Tomato	nucleus	55.38	52.3
PGSC0003DMT400025864	Potato	plastid	55.9	52.28
CDY26797	Canola	plastid	55.38	51.92
KRH07906	Soybean	plastid	54.87	51.32
EER92482	Sorghum	plastid	49.74	51.05
Bra011627.1-P	Field mustard	plastid	52.56	50.74
VIT_18s0122g01260.t01	Wine grape	plastid	58.21	50.67
KRH07902	Soybean	plastid	50.26	50.65
CDY40618	Canola	plastid	50.26	50.39
Bra017725.1-P	Field mustard	plastid	50.26	50.39
CDX72550	Canola	plastid	50.51	50.26
Bra037280.1-P	Field mustard	plastid	52.82	50.24
AT4G35600.2	Thale cress	plastid	53.33	49.52
EES18885	Sorghum	plastid	51.03	49.14
CDX75515	Canola	plastid	53.59	48.95
CDY24816	Canola	cytosol, plastid	45.9	48.77
CDX69153	Canola	plastid	53.59	48.6
Bra017724.1-P	Field mustard	plastid	54.1	48.51
CDY40619	Canola	plastid	54.1	48.51
CDX72549	Canola	plastid	53.85	48.28
Bra010530.1-P	Field mustard	plastid	52.05	48.1
CDY24815	Canola	plastid	52.05	48.1
CDY41645	Canola	plastid	52.05	48.1
EER93184	Sorghum	plastid	51.28	47.85
Bra003724.1-P	Field mustard	plastid	54.1	47.2
CDX85943	Canola	plastid	53.08	47.15
CDX87609	Canola	cytosol	54.1	46.99
CDX68102	Canola	plastid	53.33	46.95
CDX88265	Canola	cytosol	53.59	46.86
Bra008255.1-P	Field mustard	plastid	50.77	46.59
AT1G76360.1	Thale cress	plastid	56.15	45.25
KXG19409	Sorghum	mitochondrion	47.18	44.88
Bra015757.1-P	Field mustard	cytosol, plastid	46.67	44.83
EER99941	Sorghum	plastid	46.67	44.5
EER92783	Sorghum	plastid	47.95	42.6
KRH07896	Soybean	plastid	52.56	42.36
EER94269	Sorghum	plastid	46.92	42.26
EES03187	Sorghum	cytosol	48.72	38.62
EER96629	Sorghum	cytosol	47.69	37.13
OQU78536	Sorghum	plasma membrane	47.95	30.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8085682	UniProt:C5WZW3	EnsemblPlants:EER95575
ProteinID:EER95575	ProteinID:EER95575.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF182	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G517900	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8315E	RefSeq:XP_002468577.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:78399601..78403093

Molecular Weight (calculated)

42079.1 Da

IEP (calculated)

9.714

GRAVY (calculated)

-0.497

Length

390 amino acids

Sequence
(BLAST)

001: MGNCCGSADA DGKPPSRPPT KGPPPKTTTW APPTPKPSDG GGGAKQETGG GDDPPCTGPG RVLEAPRLRE FTLAELRQAT RGFKPEMVLG EGGFGRVYKG
101: WVDERTLNPA KSNAGVIVAV KKLNPESVQG LQEWQSEVNF LGRLSHPNLV RLLGYCGEDR ELLLVYEFMS KGSLENHLFR RGGNLEALSW SRRLKIATGA
201: ARGLAFLHSS EKQVIYRDFK ASNILLDSDY TAKLSDFGLA KNGPSAGKSH VTTRIIGTYG YAAPEYVATG HLYVKSDVYG FGVVLLELLT GLRAHDLNRP
301: SHQHNLVEWA KPYLSGAGKL KSLMDQRIDG QYNTKAALRA ARLAGKCLTG DPKSRPSMDD VVAALEDIEA PQQGAGGHRD LPPRPGARRS

Best Arabidopsis Sequence Match ( AT2G17220.1 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK
101: VFKGWLEDKT PGKQSNGTVI AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL FRKGSAVQPL SWEIRLKIAI
201: GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT
301: RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ
401: LSSFRPRQNV SRAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.