Factsheet for GSMUA_Achr4P04920_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P14810_001	Banana	plastid	77.72	72.29
GSMUA_Achr1P18020_001	Banana	plastid	80.31	72.26
KRH07892	Soybean	cytosol	46.63	68.97
Os06t0727400-01	Rice	plasma membrane	72.54	67.63
GSMUA_Achr3P26960_001	Banana	plastid	66.58	67.45
TraesCS7B01G473700.1	Wheat	plastid	69.43	65.05
EER90433	Sorghum	plastid	69.95	64.44
TraesCSU01G105900.1	Wheat	plastid	69.17	64.18
TraesCS7A01G550300.1	Wheat	plastid	68.91	63.94
Zm00001d014850_P002	Maize	plastid	68.13	63.68
KRH28911	Soybean	plastid	60.1	63.39
TraesCS2D01G038200.1	Wheat	cytosol	63.47	62.98
EER95575	Sorghum	cytosol	63.21	62.56
KRH39445	Soybean	plastid	64.25	62.47
PGSC0003DMT400048049	Potato	plastid	66.58	62.08
VIT_04s0044g00050.t01	Wine grape	plastid	48.7	61.84
PGSC0003DMT400045075	Potato	plastid	66.32	61.69
KRH74099	Soybean	plastid	65.54	61.41
Solyc03g032150.2.1	Tomato	plastid	65.8	60.77
KRH14015	Soybean	plastid	64.51	60.44
Zm00001d026126_P001	Maize	plastid	70.73	59.87
Zm00001d048342_P001	Maize	plastid	62.95	59.56
Solyc01g112220.2.1	Tomato	plastid	63.21	59.51
KXG26902	Sorghum	cytosol	70.98	59.44
TraesCS2A01G039600.1	Wheat	cytosol	64.51	59.0
TraesCS6D01G235300.1	Wheat	cytosol	66.58	58.68
AT2G17220.1	Thale cress	plastid	62.69	58.45
KRH51603	Soybean	mitochondrion, plastid	55.7	58.27
VIT_03s0038g03800.t01	Wine grape	plastid	64.25	58.22
PGSC0003DMT400038068	Potato	plastid	62.95	58.13
TraesCS2B01G422500.1	Wheat	cytosol	67.88	57.84
CDY31372	Canola	plastid	61.4	57.8
Bra002031.1-P	Field mustard	plastid	61.4	57.8
TraesCS2A01G404600.1	Wheat	cytosol	67.88	57.33
CDX71350	Canola	plastid	60.88	57.32
CDY47489	Canola	plastid	60.88	57.04
KRH60921	Soybean	cytosol	54.66	57.03
TraesCS2D01G401500.2	Wheat	cytosol	67.36	56.89
KRH28912	Soybean	plastid	59.33	56.54
TraesCS6A01G253700.1	Wheat	cytosol	66.32	56.51
Os02t0670100-00	Rice	cytosol, plasma membrane	67.62	56.49
CDY26797	Canola	plastid	60.88	56.49
HORVU6Hr1G064690.4	Barley	cytosol	66.58	56.36
GSMUA_Achr2P11330_001	Banana	cytosol	50.26	55.75
GSMUA_Achr6P15230_001	Banana	plastid	54.92	55.5
GSMUA_Achr8P34290_001	Banana	plastid	56.74	55.44
TraesCS6B01G271700.1	Wheat	cytosol	66.06	55.43
Os04t0563900-00	Rice	plasma membrane	68.13	55.37
EES05745	Sorghum	cytosol	67.62	55.18
Bra037280.1-P	Field mustard	plastid	58.29	54.88
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	59.33	54.65
Bra017725.1-P	Field mustard	plastid	54.92	54.5
CDY40618	Canola	plastid	54.92	54.5
Zm00001d051424_P001	Maize	plastid	62.95	54.48
Zm00001d027509_P002	Maize	cytosol	52.85	54.4
VIT_18s0122g01270.t01	Wine grape	plastid	58.81	54.31
HORVU7Hr1G121690.5	Barley	plastid	68.91	53.52
KRH07906	Soybean	plastid	57.77	53.48
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	57.77	53.48
CDX72550	Canola	plastid	54.15	53.32
GSMUA_Achr11P...	Banana	cytosol	51.55	53.21
TraesCS2B01G052500.1	Wheat	cytosol	63.21	52.81
PGSC0003DMT400025864	Potato	plastid	56.99	52.76
GSMUA_Achr8P02170_001	Banana	plastid	51.3	52.52
Bra011627.1-P	Field mustard	plastid	54.92	52.48
Solyc04g082500.2.1	Tomato	nucleus	55.96	52.3
GSMUA_Achr10P...	Banana	plastid	56.48	52.28
CDY24816	Canola	cytosol, plastid	49.22	51.77
VIT_18s0122g01260.t01	Wine grape	plastid	59.59	51.34
GSMUA_Achr10P...	Banana	plastid	54.92	51.33
CDY40619	Canola	plastid	57.51	51.03
Bra017724.1-P	Field mustard	plastid	57.51	51.03
CDX72549	Canola	plastid	57.25	50.8
AT4G35600.2	Thale cress	plastid	54.92	50.48
CDX75515	Canola	plastid	55.7	50.35
CDX69153	Canola	plastid	55.96	50.23
KRH07902	Soybean	plastid	50.26	50.13
CDY41645	Canola	plastid	54.66	50.0
CDY24815	Canola	plastid	54.15	49.53
Bra010530.1-P	Field mustard	plastid	54.15	49.53
GSMUA_Achr2P07470_001	Banana	plastid	50.78	47.12
GSMUA_Achr10P...	Banana	plastid	47.67	47.06
GSMUA_Achr1P21600_001	Banana	plastid	50.26	46.97
GSMUA_Achr6P08550_001	Banana	plastid	47.41	46.92
GSMUA_AchrUn_...	Banana	plastid	52.85	46.9
GSMUA_Achr3P26530_001	Banana	plasma membrane	48.45	46.06
Bra008255.1-P	Field mustard	plastid	50.52	45.88
CDX87609	Canola	cytosol	53.11	45.66
Bra003724.1-P	Field mustard	plastid	52.85	45.64
CDX68102	Canola	plastid	52.07	45.37
CDX85943	Canola	plastid	51.55	45.33
CDX88265	Canola	cytosol	52.07	45.07
GSMUA_Achr6P10640_001	Banana	plastid	46.63	44.55
KRH07896	Soybean	plastid	55.7	44.42
Bra015757.1-P	Field mustard	cytosol, plastid	45.85	43.6
AT1G76360.1	Thale cress	plastid	54.4	43.39
GSMUA_Achr10P...	Banana	cytosol	51.81	35.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr4G04920_001	EnsemblPlants:GSMUA_Achr4P04920_001	EnsemblPlants:GSMUA_Achr4T04920_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SL59
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000294EEBF	SEG:seg	:	:	:	:

Description

Protein kinase APK1B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G04920_001]

Coordinates

chr4:-:3847139..3851324

Molecular Weight (calculated)

42360.6 Da

IEP (calculated)

9.429

GRAVY (calculated)

-0.323

Length

386 amino acids

Sequence
(BLAST)

001: MGNCLGFYPG SQSPSDTRPS SSAHSTSKAS GSTVTEKLST LSGSNFSQSI VSGASTDEGF LDGQILEVPN LRVFTFSELK IATRNFKPDT VLGEGGFGRV
101: YKGWVEEKTL NPAKSGIGMV VAVKKLNPES MQGLEQWQSE VNFLGRLSHP NLVKLLGYCL EDEELLLVYE YMARGSLENH LFRKGSAFEP LSWSLRLKIA
201: IGAARGLAFL HTSEKQVIYR DFKASNILLD SNYNAKLSDF GLAKHGPSGG DSHVTTRVMG TYGYAAPEYV ATGHLYVKSD VYGFGVMLLE MLSGQRALDT
301: NRPSGQHNLI DFARPMLADR RKLARLIDNR LEGQYSSKGA YQVAQLTLKC LAGDPRSRPS MKEVVQTLEK IEALKSRSRE AKNVSH

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.