Factsheet for Zm00001d051424_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05745	Sorghum	cytosol	84.53	79.7
TraesCS6D01G235300.1	Wheat	cytosol	70.18	71.46
TraesCS6A01G253700.1	Wheat	cytosol	71.97	70.86
Os02t0670100-00	Rice	cytosol, plasma membrane	72.65	70.13
HORVU6Hr1G064690.4	Barley	cytosol	71.08	69.52
TraesCS6B01G271700.1	Wheat	cytosol	70.18	68.04
KRH07892	Soybean	cytosol	37.89	64.75
GSMUA_Achr4P04920_001	Banana	plastid	54.48	62.95
GSMUA_Achr3P14810_001	Banana	plastid	55.38	59.52
GSMUA_Achr1P18020_001	Banana	plastid	56.05	58.28
Zm00001d048342_P001	Maize	plastid	52.69	57.6
Zm00001d014850_P002	Maize	plastid	52.91	57.14
Zm00001d026126_P001	Maize	plastid	57.62	56.36
Zm00001d054014_P002	Maize	cytosol, plastid	54.26	56.28
KRH39445	Soybean	plastid	49.33	55.42
Solyc01g112220.2.1	Tomato	plastid	50.9	55.37
GSMUA_Achr3P26960_001	Banana	plastid	47.09	55.12
VIT_03s0038g03800.t01	Wine grape	plastid	52.47	54.93
KRH28911	Soybean	plastid	45.07	54.92
PGSC0003DMT400038068	Potato	plastid	51.35	54.78
KRH74099	Soybean	plastid	50.45	54.61
PGSC0003DMT400045075	Potato	plastid	50.45	54.22
PGSC0003DMT400048049	Potato	plastid	50.22	54.11
KRH14015	Soybean	plastid	49.78	53.88
Solyc03g032150.2.1	Tomato	plastid	50.22	53.59
Zm00001d015012_P001	Maize	plastid	54.04	53.2
CDY31372	Canola	plastid	48.65	52.93
Bra002031.1-P	Field mustard	plastid	48.65	52.93
KRH60921	Soybean	cytosol	43.72	52.7
CDX71350	Canola	plastid	48.43	52.68
KRH51603	Soybean	mitochondrion, plastid	43.5	52.57
AT2G17220.1	Thale cress	plastid	48.65	52.42
Zm00001d027509_P002	Maize	cytosol	43.72	52.0
VIT_04s0044g00050.t01	Wine grape	plastid	35.2	51.64
CDY47489	Canola	plastid	47.09	50.97
CDY26797	Canola	plastid	47.09	50.48
Bra037280.1-P	Field mustard	plastid	45.74	49.76
KRH28912	Soybean	plastid	44.84	49.38
CDY40618	Canola	plastid	43.05	49.36
Bra017725.1-P	Field mustard	plastid	43.05	49.36
VIT_18s0122g01270.t01	Wine grape	plastid	46.19	49.28
Solyc04g082500.2.1	Tomato	nucleus	45.52	49.15
AT4G35600.2	Thale cress	plastid	45.96	48.81
Bra011627.1-P	Field mustard	plastid	44.17	48.76
CDY40619	Canola	plastid	47.31	48.51
Bra017724.1-P	Field mustard	plastid	47.31	48.51
PGSC0003DMT400025864	Potato	plastid	45.29	48.44
Zm00001d011066_P004	Maize	plastid	44.84	48.31
CDX72550	Canola	plastid	42.38	48.21
KRH07906	Soybean	plastid	45.07	48.2
KRH07902	Soybean	plastid	41.48	47.8
CDY24816	Canola	cytosol, plastid	39.24	47.68
CDX72549	Canola	plastid	46.41	47.59
VIT_18s0122g01260.t01	Wine grape	plastid	47.76	47.54
CDX69153	Canola	plastid	45.74	47.44
Zm00001d012958_P001	Maize	plastid	44.17	47.13
Zm00001d034662_P001	Maize	plastid	43.95	46.78
Bra010530.1-P	Field mustard	plastid	44.17	46.68
CDY24815	Canola	plastid	44.17	46.68
CDY41645	Canola	plastid	44.17	46.68
Zm00001d028613_P001	Maize	plastid	42.38	46.67
CDX75515	Canola	plastid	44.62	46.6
CDX87609	Canola	cytosol	45.74	45.43
Zm00001d022549_P001	Maize	plastid	39.46	45.36
CDX88265	Canola	cytosol	45.29	45.29
Bra003724.1-P	Field mustard	plastid	44.62	44.52
Bra008255.1-P	Field mustard	plastid	42.38	44.47
Zm00001d045191_P001	Maize	mitochondrion	40.36	44.44
CDX85943	Canola	plastid	43.72	44.42
CDX68102	Canola	plastid	43.95	44.24
Zm00001d033004_P004	Maize	plastid	42.15	43.12
Bra015757.1-P	Field mustard	cytosol, plastid	39.24	43.1
AT1G76360.1	Thale cress	plastid	46.19	42.56
Zm00001d048314_P001	Maize	cytosol, plastid	42.15	41.23
KRH07896	Soybean	plastid	42.6	39.26
Zm00001d044324_P001	Maize	cytosol	42.83	38.05
Zm00001d020213_P003	Maize	cytosol	42.15	37.3
Zm00001d005647_P002	Maize	cytosol	41.93	36.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6Q6T9	ProteinID:AQK54207.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF2	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000843C2AC	EnsemblPlantsGene:Zm00001d051424	EnsemblPlants:Zm00001d051424_P001	EnsemblPlants:Zm00001d051424_T001	SEG:seg	:

Description

Probable serine/threonine-protein kinase Cx32 chloroplastic

Coordinates

chr4:-:158063199..158065701

Molecular Weight (calculated)

47379.5 Da

IEP (calculated)

10.186

GRAVY (calculated)

-0.292

Length

446 amino acids

Sequence
(BLAST)

001: MGNCFGSNVA EVGAVKAMAQ AHHAHPQVAL AKHVVMSAAP SSAAQSHHAA ARHQGVPVPV PGKLPPPATA TATGGAGGSR PPAAAGGGSD RQPDGRILEA
101: PNLRVFTFAE LKAATRSFKP DTVLGEGGFG RVYKGWVDER TMGPARNDSG GLPVASEVNF LGRLSHPNLV RLLGYCWEDK ELLLVYEYMA KGSLENHLFG
201: SEPRKGGGGA VQPLPWSLRL RIVTGAARGL AFLHSSEKHV IYRDFKASNI LLDTHFNAKL SDLGLAKDGP AGGSSHVTTR VMGTYGYAAP EYVATGHLYV
301: KSDVYGFGVV LLEVLTGLRA LDTDRPTAQH SLVDWAKPYL ADRRKLARLM DPRLEGQYPS RGAQRAAQLT LRCLAADHKN RPSMREVVAV LEEIESMSSR
401: AATRLDGSAS PRPTPLRNGH SQRPGSSGST LDWAGPAPAP SARVTR

Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)

001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG

Arabidopsis Description

At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.