Factsheet for Zm00001d028613_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92482	Sorghum	plastid	86.17	91.84
Os03t0274800-01	Rice	plasma membrane	84.2	91.18
TraesCS4B01G207500.1	Wheat	plastid	78.27	84.99
TraesCS4D01G208400.1	Wheat	plastid	78.27	84.99
TraesCS4A01G096900.1	Wheat	plastid	78.02	84.72
HORVU4Hr1G059750.3	Barley	plastid	77.78	83.55
GSMUA_Achr6P15230_001	Banana	plastid	63.7	67.54
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	65.68	63.79
Zm00001d011066_P004	Maize	plastid	65.19	63.77
GSMUA_Achr11P...	Banana	cytosol	57.78	62.57
GSMUA_Achr10P...	Banana	plastid	63.7	62.47
KRH15105	Soybean	cytosol, nucleus	58.77	62.47
KRH73031	Soybean	plastid	60.25	62.24
GSMUA_Achr8P02170_001	Banana	plastid	57.28	61.54
PGSC0003DMT400023009	Potato	cytosol, plastid	63.21	61.54
VIT_08s0007g00420.t01	Wine grape	plastid	61.23	61.23
GSMUA_Achr10P...	Banana	plastid	62.96	61.15
Solyc09g010850.2.1	Tomato	cytosol, plastid	62.72	61.06
PGSC0003DMT400028591	Potato	plastid	62.22	61.02
Solyc10g084770.1.1	Tomato	cytosol, plastid	61.98	60.77
VIT_13s0019g01080.t01	Wine grape	plastid	60.25	60.4
Zm00001d012958_P001	Maize	plastid	61.98	60.05
KRG99951	Soybean	plastid	60.49	59.76
Zm00001d034662_P001	Maize	plastid	61.73	59.67
KRH75643	Soybean	plastid	60.74	59.56
KRH65832	Soybean	plastid	60.74	59.42
KRH49102	Soybean	plastid	59.75	59.02
Solyc05g053930.2.1	Tomato	plastid	59.01	58.44
KRG97912	Soybean	cytosol	55.56	58.29
Solyc04g011520.2.1	Tomato	nucleus	56.3	57.87
PGSC0003DMT400071329	Potato	plastid	56.05	57.61
Zm00001d033004_P004	Maize	plastid	54.07	50.23
Zm00001d045191_P001	Maize	mitochondrion	50.12	50.12
Zm00001d022549_P001	Maize	plastid	47.65	49.74
Zm00001d048314_P001	Maize	cytosol, plastid	54.32	48.25
Zm00001d054014_P002	Maize	cytosol, plastid	50.37	47.44
Zm00001d026126_P001	Maize	plastid	53.33	47.37
Zm00001d048342_P001	Maize	plastid	47.41	47.06
Zm00001d014850_P002	Maize	plastid	47.16	46.25
Zm00001d015012_P001	Maize	plastid	50.62	45.25
Zm00001d020213_P003	Maize	cytosol	54.07	43.45
Zm00001d005647_P002	Maize	cytosol	54.07	43.28
Zm00001d044324_P001	Maize	cytosol	53.58	43.23
Zm00001d027509_P002	Maize	cytosol	39.75	42.93
Zm00001d051424_P001	Maize	plastid	46.67	42.38
KRH15106	Soybean	cytosol	0.99	23.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100282988	Gene3D:3.30.200.20	MapMan:50.2.7	EMBL:BT083636	UniProt:C4IYI9
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
ProteinID:ONL96570.1	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF146	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A4BB57	EnsemblPlantsGene:Zm00001d028613	EnsemblPlants:Zm00001d028613_P001	EnsemblPlants:Zm00001d028613_T001	SEG:seg

Description

Protein kinase APK1A chloroplastic

Coordinates

chr1:-:40787502..40790508

Molecular Weight (calculated)

44444.1 Da

IEP (calculated)

9.608

GRAVY (calculated)

-0.345

Length

405 amino acids

Sequence
(BLAST)

001: MGNCAGVEGN AEINPSFSAP NSSGTAGSKS VSKNAADTST FGTKTSGSSS SVPPTPRTEA EILESSNVRK FSFGELKGST RNFRPDSLLG EGGFGSVFKG
101: WMDERTLAPV RPGAGIIVAV KKLKLDSFQG HREWLAEVNY LGQLSHPNLV KLIGYCLEDE QRLLVYEYMP RGSLEHHLFR SRLSLECFVR DIPPFLASRF
201: MKKRTECYGV AGGSNFQPLP WNLRMKVALE AARGLAFLHG DQAKVIYRDF KTSNILLDSE YNAKLSDFGL AKDGPSGDKS HVSTRVMGTQ GYAAPEYLAT
301: GHLTAKSDVY SYGVVLLELL SGQRALDKNR PPGQHNLVEW ARPYITNKRR VIHVLDSRLG SQYSLPAAQK VATLALQCLS MDARCRPGMD QVVTALEQLQ
401: RPRAH

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.