Factsheet for Os03t0274800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92482	Sorghum	plastid	91.44	90.0
TraesCS4D01G208400.1	Wheat	plastid	87.7	87.94
TraesCS4A01G096900.1	Wheat	plastid	87.43	87.67
TraesCS4B01G207500.1	Wheat	plastid	87.17	87.4
HORVU4Hr1G059750.3	Barley	plastid	87.7	87.0
Zm00001d028613_P001	Maize	plastid	91.18	84.2
GSMUA_Achr6P15230_001	Banana	plastid	70.59	69.11
Os05t0110900-01	Rice	plasma membrane	69.25	65.57
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	72.99	65.47
GSMUA_Achr11P...	Banana	cytosol	64.97	64.97
Os01t0973500-01	Rice	plasma membrane	70.05	64.22
GSMUA_Achr10P...	Banana	plastid	70.86	64.16
GSMUA_Achr8P02170_001	Banana	plastid	64.17	63.66
GSMUA_Achr10P...	Banana	plastid	70.05	62.83
PGSC0003DMT400028591	Potato	plastid	68.98	62.47
KRH15105	Soybean	cytosol, nucleus	63.64	62.47
VIT_13s0019g01080.t01	Wine grape	plastid	67.38	62.38
PGSC0003DMT400023009	Potato	cytosol, plastid	69.25	62.26
Solyc10g084770.1.1	Tomato	cytosol, plastid	68.72	62.23
KRH73031	Soybean	plastid	64.97	61.99
Solyc09g010850.2.1	Tomato	cytosol, plastid	68.72	61.78
KRG99951	Soybean	plastid	67.11	61.22
VIT_08s0007g00420.t01	Wine grape	plastid	66.04	60.99
KRG97912	Soybean	cytosol	62.83	60.88
KRH49102	Soybean	plastid	66.58	60.73
Os03t0821900-01	Rice	plastid	67.91	59.91
KRH75643	Soybean	plastid	66.04	59.81
KRH65832	Soybean	plastid	66.04	59.66
Solyc05g053930.2.1	Tomato	plastid	64.97	59.41
Solyc04g011520.2.1	Tomato	nucleus	62.03	58.88
PGSC0003DMT400071329	Potato	plastid	61.76	58.63
Os09t0361100-01	Rice	cytosol, plasma membrane	56.95	55.47
Os07t0686800-01	Rice	plasma membrane, plastid	49.73	52.99
Os06t0168800-01	Rice	plasma membrane	56.68	51.58
Os10t0405100-02	Rice	plasma membrane	57.75	50.47
Os06t0727400-01	Rice	plasma membrane	54.28	49.03
Os02t0118200-01	Rice	plasma membrane	54.81	48.01
Os01t0588500-01	Rice	plasma membrane	59.89	45.34
Os04t0563900-00	Rice	plasma membrane	56.15	44.21
Os02t0670100-00	Rice	cytosol, plasma membrane	54.28	43.94
KRH15106	Soybean	cytosol	1.07	23.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EntrezGene:4332405	ProteinID:ABF95245.1
EMBL:AK102905	ProteinID:BAF11618.1	ProteinID:BAS83499.1	ncoils:Coil	ProteinID:EAZ26435.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os03g0274800	EnsemblPlants:Os03t0274800-01
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF146	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q10NC1	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0000DB4951	RefSeq:XP_015631826.1	SEG:seg	:	:	:

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 107Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-). (Os03t0274800-01)

Coordinates

chr3:-:9270240..9273393

Molecular Weight (calculated)

40876.7 Da

IEP (calculated)

9.917

GRAVY (calculated)

-0.393

Length

374 amino acids

Sequence
(BLAST)

001: MGNCAGVQGN AEINPSFSAP NSSGTGSKNS SKNGADSSTF GTKASASSSV PPTPRSETEI LQSSNLRKFT FGELKGSTRN FRPDSLLGEG GFGSVFKGWI
101: DERTLTPVKP GTGMIVAVKK LKLDSFQGHR EWLAEVNYLG QLSHPNLVKL IGYCFEDEQR LLVYEFMPRG SLEHHLFRRG SHFQPLPWNL RMKVALEAAR
201: GLAFLHSDQA KVIYRDFKTS NILLDSDYNA KLSDFGLAKD GPSGDKSHVS TRVMGTQGYA APEYLATGHL TAKSDVYSYG VVLLELLSGQ RALDKNRPPG
301: QHNLVEWARP YITNKRRVIH VLDSRLGSQY SLPAAQKIAG LAVQCLSMDA RCRPGMDQVV TALEQLQGAK KAAK

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.