Factsheet for Os04t0563900-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G422500.1	Wheat	cytosol	72.42	75.94
TraesCS2A01G404600.1	Wheat	cytosol	72.63	75.49
TraesCS2D01G401500.2	Wheat	cytosol	72.42	75.27
KXG26902	Sorghum	cytosol	72.21	74.4
Zm00001d026126_P001	Maize	plastid	71.16	74.12
TraesCS2D01G038200.1	Wheat	cytosol	58.95	71.98
TraesCS2A01G039600.1	Wheat	cytosol	62.32	70.14
GSMUA_Achr4P04920_001	Banana	plastid	55.37	68.13
KRH07892	Soybean	cytosol	36.42	66.28
Os02t0118200-01	Rice	plasma membrane	57.05	63.47
GSMUA_Achr1P18020_001	Banana	plastid	57.26	63.4
GSMUA_Achr3P14810_001	Banana	plastid	55.16	63.13
Os02t0670100-00	Rice	cytosol, plasma membrane	61.05	62.77
TraesCS2B01G052500.1	Wheat	cytosol	61.05	62.77
Os06t0727400-01	Rice	plasma membrane	54.11	62.08
Solyc01g112220.2.1	Tomato	plastid	53.47	61.95
GSMUA_Achr3P26960_001	Banana	plastid	49.68	61.94
PGSC0003DMT400045075	Potato	plastid	53.68	61.45
PGSC0003DMT400038068	Potato	plastid	53.05	60.29
KRH28911	Soybean	plastid	46.32	60.11
KRH74099	Soybean	plastid	51.58	59.47
KRH39445	Soybean	plastid	49.47	59.19
PGSC0003DMT400048049	Potato	plastid	51.58	59.18
KRH14015	Soybean	plastid	50.95	58.74
VIT_04s0044g00050.t01	Wine grape	plastid	37.47	58.55
VIT_03s0038g03800.t01	Wine grape	plastid	52.21	58.22
Solyc03g032150.2.1	Tomato	plastid	51.16	58.13
AT2G17220.1	Thale cress	plastid	50.32	57.73
Bra002031.1-P	Field mustard	plastid	49.68	57.56
CDY31372	Canola	plastid	49.68	57.56
CDX71350	Canola	plastid	49.47	57.32
KRH51603	Soybean	mitochondrion, plastid	44.0	56.64
CDY47489	Canola	plastid	48.84	56.31
Os03t0274800-01	Rice	plasma membrane	44.21	56.15
KRH60921	Soybean	cytosol	43.58	55.95
CDY26797	Canola	plastid	48.84	55.77
Os05t0110900-01	Rice	plasma membrane	45.68	54.94
Bra037280.1-P	Field mustard	plastid	47.16	54.63
KRH28912	Soybean	plastid	46.32	54.32
Os01t0973500-01	Rice	plasma membrane	46.53	54.17
VIT_18s0122g01270.t01	Wine grape	plastid	47.58	54.07
Solyc04g082500.2.1	Tomato	nucleus	45.68	52.54
PGSC0003DMT400025864	Potato	plastid	45.89	52.28
Os07t0686800-01	Rice	plasma membrane, plastid	38.32	51.85
KRH07906	Soybean	plastid	45.47	51.8
KRH07902	Soybean	plastid	41.89	51.42
Bra011627.1-P	Field mustard	plastid	43.58	51.24
CDY40618	Canola	plastid	41.89	51.16
Bra017725.1-P	Field mustard	plastid	41.89	51.16
VIT_18s0122g01260.t01	Wine grape	plastid	48.21	51.12
Os03t0821900-01	Rice	plastid	45.47	50.94
Os09t0361100-01	Rice	cytosol, plasma membrane	40.42	50.0
CDX72549	Canola	plastid	45.68	49.89
CDX72550	Canola	plastid	41.05	49.74
Bra017724.1-P	Field mustard	plastid	45.47	49.66
CDY40619	Canola	plastid	45.47	49.66
CDY24816	Canola	cytosol, plastid	38.32	49.59
CDX69153	Canola	plastid	44.63	49.3
AT4G35600.2	Thale cress	plastid	43.58	49.29
CDX75515	Canola	plastid	44.0	48.95
CDY24815	Canola	plastid	43.37	48.82
CDY41645	Canola	plastid	43.37	48.82
Bra010530.1-P	Field mustard	plastid	43.37	48.82
CDX87609	Canola	cytosol	45.68	48.33
Os10t0405100-02	Rice	plasma membrane	43.37	48.13
CDX88265	Canola	cytosol	45.05	47.98
Bra015757.1-P	Field mustard	cytosol, plastid	39.79	46.55
CDX85943	Canola	plastid	42.74	46.24
Os06t0168800-01	Rice	plasma membrane	40.0	46.23
Bra008255.1-P	Field mustard	plastid	41.26	46.12
Bra003724.1-P	Field mustard	plastid	43.16	45.86
CDX68102	Canola	plastid	42.53	45.6
AT1G76360.1	Thale cress	plastid	44.63	43.8
KRH07896	Soybean	plastid	42.74	41.94
Os01t0588500-01	Rice	plasma membrane	42.95	41.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:BAS90504.1	ProteinID:CAE03087.2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os04g0563900	EnsemblPlants:Os04t0563900-00	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF13
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q7XQK6	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00001B167E	SEG:seg	:	:	:	:

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 157Similar to H0409D10.5 protein. (Os04t0563900-00)

Coordinates

chr4:-:28262938..28265746

Molecular Weight (calculated)

51456.1 Da

IEP (calculated)

10.109

GRAVY (calculated)

-0.396

Length

475 amino acids

Sequence
(BLAST)

001: MGNCFGSEEA EAAATVRAPA QGHHGRRQDS DQISNLAAEA AAPANRRSPI MAPPKALASM SSAAGHHSGM RSSSSMSSIT TRSSSSSSNL PLGAAGGADV
101: GVAGALYPEP EGRILEVPNL RIFTFAELRA ATRNFKPDSV LGEGGFGRVY KGWVDERTMS PARSGTGMVI AVKKLNPESV QGLQEWQSEI NFLGRLSHPN
201: LVRLIGYCVE DRELLLVYEF MAKGSLENHL FRKGSAYQPI SWNLCLRIAI GAARGLAFLH SSERQIIYRD FKASNILLDT HYNAKLSDFG LAKNGPTAGE
301: SHVTTRVMGT YGYAAPEYVA TGHLYVKSDV YGFGVVLLEM LTGMRALDTG RPAPQHSLVE WAKPYLADRR KLARLVDPRL EGQYPSRAAQ QAAQLTLRCL
401: SGDPRSRPSM AEVVQALVEI ERIRSRPKAA SSREDASPRV PTRSGGHGHH HHHHSSRPRS GSDGARSGYP SPRVR

Best Arabidopsis Sequence Match ( AT2G17220.1 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK
101: VFKGWLEDKT PGKQSNGTVI AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL FRKGSAVQPL SWEIRLKIAI
201: GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT
301: RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ
401: LSSFRPRQNV SRAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.