Factsheet for PGSC0003DMT400025864

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082500.2.1	Tomato	nucleus	93.05	93.95
KRH60921	Soybean	cytosol	57.79	65.14
KRH51603	Soybean	mitochondrion, plastid	57.07	64.5
VIT_18s0122g01270.t01	Wine grape	plastid	63.55	63.4
VIT_18s0122g01260.t01	Wine grape	plastid	65.47	60.94
GSMUA_Achr4P04920_001	Banana	plastid	52.76	56.99
EER95575	Sorghum	cytosol	52.28	55.9
PGSC0003DMT400045075	Potato	plastid	55.4	55.66
GSMUA_Achr3P14810_001	Banana	plastid	54.92	55.18
Bra008255.1-P	Field mustard	plastid	56.12	55.06
PGSC0003DMT400048049	Potato	plastid	53.96	54.35
GSMUA_Achr1P18020_001	Banana	plastid	55.4	53.85
GSMUA_Achr3P26960_001	Banana	plastid	48.92	53.54
CDX87609	Canola	cytosol	57.55	53.45
TraesCS2D01G038200.1	Wheat	cytosol	49.64	53.21
Os06t0727400-01	Rice	plasma membrane	52.76	53.14
CDX88265	Canola	cytosol	56.83	53.14
CDX85943	Canola	plastid	55.88	53.08
Os02t0118200-01	Rice	plasma membrane	53.48	52.22
Zm00001d048342_P001	Maize	plastid	51.08	52.21
TraesCS6A01G052100.2	Wheat	plastid	54.44	52.18
Bra003724.1-P	Field mustard	plastid	55.88	52.13
TraesCS6B01G069800.1	Wheat	plastid	54.44	52.06
PGSC0003DMT400095910	Potato	cytosol	41.01	51.98
CDX68102	Canola	plastid	55.16	51.92
Zm00001d054014_P002	Maize	cytosol, plastid	53.48	51.86
HORVU6Hr1G010050.1	Barley	plastid	54.2	51.83
TraesCSU01G111800.1	Wheat	plastid	54.2	51.83
PGSC0003DMT400038068	Potato	plastid	51.8	51.67
EES04370	Sorghum	plastid	53.96	51.61
Zm00001d014850_P002	Maize	plastid	51.08	51.57
TraesCS7B01G473700.1	Wheat	plastid	50.84	51.46
EER90433	Sorghum	plastid	51.56	51.31
Bra015757.1-P	Field mustard	cytosol, plastid	49.88	51.23
TraesCS7A01G550300.1	Wheat	plastid	50.6	50.72
AT1G76360.1	Thale cress	plastid	58.75	50.62
TraesCSU01G105900.1	Wheat	plastid	50.36	50.48
PGSC0003DMT400011261	Potato	plastid	48.44	50.37
Zm00001d015012_P001	Maize	plastid	54.44	50.11
GSMUA_Achr2P11330_001	Banana	cytosol	41.73	50.0
TraesCS6D01G235300.1	Wheat	cytosol	52.52	50.0
KXG26902	Sorghum	cytosol	55.16	49.89
Zm00001d026126_P001	Maize	plastid	54.44	49.78
TraesCS2A01G039600.1	Wheat	cytosol	50.36	49.76
TraesCS6A01G253700.1	Wheat	cytosol	53.48	49.23
TraesCS6B01G271700.1	Wheat	cytosol	54.2	49.13
HORVU6Hr1G064690.4	Barley	cytosol	53.72	49.12
Zm00001d027509_P002	Maize	cytosol	43.65	48.53
HORVU6Hr1G009900.9	Barley	mitochondrion	38.85	48.36
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	48.44	48.21
Os02t0670100-00	Rice	cytosol, plasma membrane	53.24	48.05
TraesCS2B01G422500.1	Wheat	cytosol	52.04	47.9
PGSC0003DMT400002280	Potato	plastid	47.96	47.73
PGSC0003DMT400028591	Potato	plastid	47.24	47.7
TraesCS6A01G051600.1	Wheat	cytosol	42.69	47.47
TraesCS6B01G069300.1	Wheat	cytosol	42.69	47.34
PGSC0003DMT400003582	Potato	cytosol	40.29	47.32
TraesCS2D01G401500.2	Wheat	cytosol	51.56	47.05
TraesCS2A01G404600.1	Wheat	cytosol	51.56	47.05
PGSC0003DMT400071329	Potato	plastid	44.36	46.95
PGSC0003DMT400065801	Potato	plastid	47.24	46.9
PGSC0003DMT400023009	Potato	cytosol, plastid	46.52	46.63
EES05745	Sorghum	cytosol	52.76	46.51
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	41.73	46.4
Os04t0563900-00	Rice	plasma membrane	52.28	45.89
TraesCSU01G110700.2	Wheat	cytosol	41.25	45.74
Zm00001d051424_P001	Maize	plastid	48.44	45.29
PGSC0003DMT400082362	Potato	plastid	42.69	44.95
TraesCS2B01G052500.1	Wheat	cytosol	47.96	43.29
HORVU7Hr1G121690.5	Barley	plastid	50.84	42.66
PGSC0003DMT400079361	Potato	cytosol	45.08	39.25
PGSC0003DMT400045429	Potato	cytosol	44.6	38.99
PGSC0003DMT400002229	Potato	cytosol	44.84	38.8
PGSC0003DMT400049853	Potato	plasma membrane	42.21	36.51

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102600547	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AM82	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400009985
PGSC:PGSC0003DMG400009985	EnsemblPlants:PGSC0003DMT400025864	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF5	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295E838	RefSeq:XP_006342141.1	:	:	:

Description

Serine/threonine-protein kinase cx32 [Source:PGSC_GENE;Acc:PGSC0003DMG400009985]

Coordinates

chr4:-:71681368..71686383

Molecular Weight (calculated)

46274.8 Da

IEP (calculated)

9.988

GRAVY (calculated)

-0.472

Length

417 amino acids

Sequence
(BLAST)

001: MGNCWPKPVD VHPPTVKYSN SIPSVIVKKP INTSPGSNTR NVVAKSSGDG GDSRKVEVPA SGKIITPNLK MFTLAELKSA TRNFRPDTVL GEGGFGTVFK
101: GWVDDKTFAP SKVGVGMPVA VKKSNPDSEQ GLKEWQAEVK FLGKFSHPNL VKLIGYCWEE KTFLLVYEHM QKGSLESHLF RKEGAEALSW DTRLKIAIGA
201: ARGLEFLHTT EKQVIYRDFK AANILLDTDY NAKLSDFGLA KMGPVNGDSH VTTKIVGTYG YAAPEYMATG HLYVKSDVYG FGVVLLEILS GRRVLDLNRP
301: NGEHNLVDWA KPMLPDKKKL RKLMDPRLEA QYPSKAAFQI AEIILKCLEP DPKNRPSMEE ILECLEQCNG IQMKPRAKNT TRNHNHRGHR SPLHVKKTGS
401: GNVIGNQGYK APTNRSY

Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)

001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG

Arabidopsis Description

At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.