Factsheet for PGSC0003DMT400079361

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007980.2.1	Tomato	nucleus	91.23	99.32
VIT_11s0016g05720.t01	Wine grape	cytosol	75.78	84.62
KRH20145	Soybean	cytosol	76.41	83.75
KRH03664	Soybean	cytosol	76.2	82.95
Zm00001d045191_P001	Maize	mitochondrion	61.8	73.09
KXG19409	Sorghum	mitochondrion	62.21	72.68
Os06t0168800-01	Rice	plasma membrane	60.75	70.8
TraesCS7A01G131300.1	Wheat	mitochondrion	59.5	68.84
TraesCS7D01G130600.2	Wheat	mitochondrion	59.08	68.36
TraesCS7B01G031900.1	Wheat	mitochondrion	59.08	68.36
HORVU7Hr1G027480.3	Barley	plastid	59.29	68.27
PGSC0003DMT400003582	Potato	cytosol	42.17	56.9
PGSC0003DMT400045429	Potato	cytosol	54.7	54.93
PGSC0003DMT400011261	Potato	plastid	45.93	54.86
PGSC0003DMT400002229	Potato	cytosol	55.11	54.77
PGSC0003DMT400095910	Potato	cytosol	37.58	54.71
PGSC0003DMT400071329	Potato	plastid	43.63	53.05
PGSC0003DMT400002280	Potato	plastid	45.72	52.27
PGSC0003DMT400065801	Potato	plastid	45.09	51.43
PGSC0003DMT400028591	Potato	plastid	44.05	51.09
PGSC0003DMT400023009	Potato	cytosol, plastid	43.42	50.0
PGSC0003DMT400082362	Potato	plastid	40.71	49.24
PGSC0003DMT400045075	Potato	plastid	39.25	45.3
PGSC0003DMT400025864	Potato	plastid	39.25	45.08
PGSC0003DMT400048049	Potato	plastid	38.41	44.44
PGSC0003DMT400038068	Potato	plastid	37.79	43.3
PGSC0003DMT400049853	Potato	plasma membrane	38.2	37.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102584665	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D1P6	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400030894
PGSC:PGSC0003DMG400030894	EnsemblPlants:PGSC0003DMT400079361	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF125	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002951899	SEG:seg	:	:	:

Description

Protein kinase APK1B, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400030894]

Coordinates

chr7:+:4190096..4193398

Molecular Weight (calculated)

53220.7 Da

IEP (calculated)

9.807

GRAVY (calculated)

-0.399

Length

479 amino acids

Sequence
(BLAST)

001: MEKEKKKEKN CGCWAVLRLS NVIGGSSDSK HSVNSIPRTS LVYDAVVLVE GDGIFRADAP YRTKVAHFLL FNGKIGVDGV FSAATETRYL NASNREMCVP
101: DEARVSSDHT PTDPPTQLPP AAENKVQRQL LQFTFHELKS ATGNFRPDSI LGEGGFGYVF KGWIEENGTA PAKPGSGVTV AVKSLKPDGL QGHREWVAEV
201: DFLGQLHHPN LVKLIGYCIE DDQRLLVYEF MTRGSLENHL FRRTIPLPWS NRLKIALGAA KGLAFLHGGS EPVIYRDFKT SNILLDSEYN AKLSDFGLAK
301: AGPQGDKTHV STRVVGTYGY AAPEYVMTGH LTAKSDVFSF GVVLLEILTG RRSMDKKRPS GEQNLVAWAK PYLADKRKFY QLVDPRLELN YSLKGVQKIS
401: QLAYICLSRD SKSRPSMDEI VKALTPLQDL NDFAILSNHS RLTQSGRRKK KLDGMQQLSF NHSRSIRGSP LHSGRQHCK

Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)

001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT

Arabidopsis Description

PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.