Factsheet for PGSC0003DMT400045429

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400019556
PGSC0003DMT400046670
PGSC0003DMT400063083
PGSC0003DMT400069639

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01300.1	PGSC0003DMT400063083	AT5G61010.1	21798944
AT5G15080.1	PGSC0003DMT400019556	AT4G24690.1	21798944
AT5G15080.1	PGSC0003DMT400046670	AT4G24690.1	21798944
AT5G15080.1	PGSC0003DMT400069639	AT4G24690.1	21798944
AT5G15080.1	PGSC0003DMT400063083	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g007050.2.1	Tomato	cytosol	99.16	98.95
PGSC0003DMT400002229	Potato	cytosol	93.08	92.12
VIT_01s0026g01620.t01	Wine grape	cytosol	89.31	88.57
KRG99168	Soybean	nucleus	88.47	86.65
KRH45845	Soybean	nucleus	88.05	86.24
KRH74775	Soybean	cytosol	88.68	86.15
Os09t0361100-01	Rice	cytosol, plasma membrane	67.09	83.33
GSMUA_AchrUn_...	Banana	plastid	75.47	82.76
KRH69360	Soybean	cytosol	87.63	82.28
KRH01126	Soybean	cytosol	76.31	76.79
KRH40135	Soybean	cytosol	76.1	76.58
TraesCS3B01G241300.1	Wheat	cytosol	75.26	75.26
AT5G15080.1	Thale cress	cytosol	77.36	74.85
TraesCS3A01G210700.1	Wheat	cytosol	74.63	74.63
TraesCS3D01G213600.1	Wheat	cytosol	74.63	74.63
HORVU3Hr1G051080.3	Barley	cytosol	75.26	73.42
KRG93494	Soybean	cytosol	74.21	72.69
Bra039129.1-P	Field mustard	nucleus	74.0	72.63
CDX78606	Canola	nucleus	76.73	72.62
Bra006278.1-P	Field mustard	nucleus	76.73	72.62
Os01t0588500-01	Rice	plasma membrane	75.05	72.47
CDX70589	Canola	nucleus	76.52	72.42
Bra040508.1-P	Field mustard	nucleus	73.58	72.37
CDY37534	Canola	nucleus	74.0	72.34
CDY49042	Canola	cytosol	73.17	72.26
EER96629	Sorghum	cytosol	75.68	72.06
TraesCS5D01G195800.2	Wheat	cytosol	75.26	71.94
TraesCS5A01G193300.2	Wheat	cytosol	75.26	71.94
AT3G01300.1	Thale cress	nucleus	73.79	71.84
CDY28689	Canola	nucleus	73.17	71.66
CDY59664	Canola	cytosol	71.91	71.61
Zm00001d020213_P003	Maize	cytosol	75.47	71.43
EES03187	Sorghum	cytosol	73.58	71.34
AT3G28690.2	Thale cress	cytosol	71.07	71.22
Bra033053.1-P	Field mustard	cytosol	69.6	70.49
Zm00001d005647_P002	Maize	cytosol	74.42	70.16
CDY47249	Canola	cytosol	69.18	70.06
CDY04026	Canola	cytosol	68.97	69.41
TraesCS5B01G188700.1	Wheat	cytosol	75.05	69.38
Zm00001d044324_P001	Maize	cytosol	72.96	69.32
HORVU5Hr1G056920.1	Barley	cytosol	75.05	68.32
PGSC0003DMT400003582	Potato	cytosol	47.59	63.94
PGSC0003DMT400011261	Potato	plastid	49.9	59.35
PGSC0003DMT400071329	Potato	plastid	46.54	56.35
PGSC0003DMT400095910	Potato	cytosol	38.36	55.62
PGSC0003DMT400079361	Potato	cytosol	54.93	54.7
PGSC0003DMT400002280	Potato	plastid	47.59	54.18
PGSC0003DMT400028591	Potato	plastid	46.75	54.0
PGSC0003DMT400082362	Potato	plastid	44.44	53.54
PGSC0003DMT400023009	Potato	cytosol, plastid	46.54	53.37
PGSC0003DMT400065801	Potato	plastid	46.33	52.62
PGSC0003DMT400045075	Potato	plastid	42.14	48.43
PGSC0003DMT400048049	Potato	plastid	41.93	48.31
PGSC0003DMT400038068	Potato	plastid	41.51	47.37
PGSC0003DMT400025864	Potato	plastid	38.99	44.6
CDY00122	Canola	cytosol	67.92	44.08
Bra039049.1-P	Field mustard	cytosol	66.04	40.33
PGSC0003DMT400049853	Potato	plasma membrane	39.83	39.42
Bra008726.1-P	Field mustard	cytosol	74.63	22.52
CDY65043	Canola	cytosol	73.38	22.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102598978	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:AAU89742	ProteinID:AAU89742.1
EMBL:AY730335	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BHN3	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400017625	PGSC:PGSC0003DMG400017625	EnsemblPlants:PGSC0003DMT400045429
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF507
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002961EC0
RefSeq:XP_006357263.1	SEG:seg	:	:	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400017625]

Coordinates

chr5:-:5946246..5952463

Molecular Weight (calculated)

52845.7 Da

IEP (calculated)

9.557

GRAVY (calculated)

-0.586

Length

477 amino acids

Sequence
(BLAST)

001: MGLGGDGEKG ESWDVEKSKG KKKKEVAEEE TGCWTKLWFI GSCISSRSKV DSSISGISTH CESKSTNTSR DQPVAPIISS TTTSNAESNS STSKLEEELK
101: VSSRLRKFAF NDLKLATRNF RPESLLGEGG FGCVFKGWIE ENGTAPVKPG TGLTVAVKTL NHDGLQGHKE WLAEVNFLGD LVHPNLVKLI GYCIEDDQRL
201: LVYEFMPRGS LENHLFRRSM PLPWSIRMKI AVGAAKGLAF LHEEAERPVI YRDFKTSNIL LDADYNAKLS DFGLAKDGPE GDKTHVSTRV MGTYGYAAPE
301: YVMTGHLTSK SDVYSFGVVL LEMITGRRSM DKNRPNGEHN LVEWARPHLG ERRRFYRLVD PRLEGHFSIK GAQKAAQLAA RCLSRDPKAR PMMSDVVEAL
401: KPLPNLKDMA SSSYYFQTMQ ADRVGSSPST KNGVRTQGSF SRNGQQHPRS LSIPNGSHAS PYHQQFPQNS PKPNGKT

Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)

001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT

Arabidopsis Description

PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.