Factsheet for TraesCS5D01G195800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G240200.1
TraesCS2A01G327000.1
TraesCS2B01G257800.1
TraesCS2B01G355000.6
TraesCS2D01G237900.1
TraesCS2D01G335900.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6A01G208300.2
TraesCS6B01G236800.1
TraesCS6D01G191900.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01300.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT3G01300.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT3G01300.1	TraesCS3D01G299200.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS2A01G327000.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS2B01G355000.6	AT4G24690.1	21798944
AT5G15080.1	TraesCS2D01G335900.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS6A01G208300.2	AT4G24690.1	21798944
AT5G15080.1	TraesCS6B01G236800.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS6D01G191900.3	AT4G24690.1	21798944
AT5G15080.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS3D01G299200.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G193300.2	Wheat	cytosol	99.6	99.6
TraesCS5B01G188700.1	Wheat	cytosol	99.2	95.93
Os09t0361100-01	Rice	cytosol, plasma membrane	73.15	95.05
HORVU5Hr1G056920.1	Barley	cytosol	98.6	93.89
EER96629	Sorghum	cytosol	90.18	89.82
Zm00001d020213_P003	Maize	cytosol	89.78	88.89
Zm00001d005647_P002	Maize	cytosol	89.98	88.74
GSMUA_AchrUn_...	Banana	plastid	69.34	79.54
TraesCS3D01G213600.1	Wheat	cytosol	72.14	75.47
PGSC0003DMT400045429	Potato	cytosol	71.94	75.26
Solyc05g007050.2.1	Tomato	cytosol	71.94	75.1
PGSC0003DMT400002229	Potato	cytosol	72.14	74.69
VIT_01s0026g01620.t01	Wine grape	cytosol	71.94	74.64
Solyc01g010780.2.1	Tomato	cytosol	71.54	74.22
KRG99168	Soybean	nucleus	71.94	73.72
KRH45845	Soybean	nucleus	71.54	73.31
KRH74775	Soybean	cytosol	70.74	71.89
KRH69360	Soybean	cytosol	70.54	69.29
AT5G15080.1	Thale cress	cytosol	67.33	68.15
KRH40135	Soybean	cytosol	64.73	68.14
KRH01126	Soybean	cytosol	64.73	68.14
Bra040508.1-P	Field mustard	nucleus	65.33	67.22
CDY28689	Canola	nucleus	65.33	66.94
AT3G01300.1	Thale cress	nucleus	65.33	66.53
CDY49042	Canola	cytosol	64.33	66.46
Bra039129.1-P	Field mustard	nucleus	64.53	66.26
CDY37534	Canola	nucleus	64.73	66.19
CDY59664	Canola	cytosol	63.53	66.18
Bra006278.1-P	Field mustard	nucleus	65.73	65.08
CDX78606	Canola	nucleus	65.73	65.08
CDX70589	Canola	nucleus	65.73	65.08
KRG93494	Soybean	cytosol	62.93	64.48
AT3G28690.2	Thale cress	cytosol	61.32	64.29
Bra033053.1-P	Field mustard	cytosol	60.52	64.12
CDY47249	Canola	cytosol	60.12	63.69
CDY04026	Canola	cytosol	59.72	62.87
TraesCS7D01G130600.2	Wheat	mitochondrion	50.1	60.39
TraesCS4D01G208400.1	Wheat	plastid	45.09	60.32
TraesCS7D01G518500.1	Wheat	cytosol	41.68	59.26
TraesCS1D01G032600.1	Wheat	plastid	46.29	57.32
TraesCS3D01G535700.1	Wheat	plastid	46.69	54.44
TraesCS5D01G493800.1	Wheat	plastid	44.89	52.71
TraesCS4D01G286100.1	Wheat	plastid	43.49	51.54
TraesCS2D01G038200.1	Wheat	cytosol	37.47	48.07
TraesCS7D01G519800.1	Wheat	cytosol	34.67	47.27
TraesCS7D01G519900.2	Wheat	plastid	37.88	46.55
TraesCS2D01G098200.1	Wheat	plastid	37.47	45.72
TraesCS6D01G235300.1	Wheat	cytosol	38.48	43.84
TraesCS2D01G401500.2	Wheat	cytosol	39.28	42.89
CDY00122	Canola	cytosol	58.72	39.86
Bra039049.1-P	Field mustard	cytosol	57.11	36.49
Bra008726.1-P	Field mustard	cytosol	65.33	20.62
CDY65043	Canola	cytosol	65.13	20.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF504	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G195800	EnsemblPlants:TraesCS5D01G195800.2	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr5D:+:299409411..299414639

Molecular Weight (calculated)

55027.4 Da

IEP (calculated)

9.778

GRAVY (calculated)

-0.574

Length

499 amino acids

Sequence
(BLAST)

001: MGLAPPELGQ FDGWESSGEE ERERWGWCRR SSRRGRRLPR KGGEEDAGVA TGCCIRLWPM GNCPPQPRSK VDTSTSSAST HGAEKSAENG SRNQPVVSVV
101: SGSTSTSNAE SSSSASKAGE EIKVSSKLRK FGFSDLKCAT RNFRPESLLG EGGFGCVFKG WIEENGTAPV KPGTGLTVAV KTLNHDGLQG HKEWVAEVDF
201: LGNLHHPNLV KLIGYCVEDD QRLLVYEFMP RGSLDNHLFR RSLPLPWSIR MKVALGAAQG LSFLHEEAER PVIYRDFKTS NILLDSEYNA KLSDFGLAKD
301: GPVGDKTHVS TRVMGTYGYA APEYVMTGHL TSKSDVYSFG VVLLEMMSGR RSMDKNRPNG EHNLVEWARP LLGERQRFYK LVDPRLEGNF SVKGAQKAAQ
401: LARACLSRDP KARPLMSQVV EALKPLLNLK DMASSSYFYQ TMQAERMAHS SSMNGRNSHS LKVHGSFARA SANGQQPMRS MSDGPRASPF RYSPKPNMK

Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)

001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT

Arabidopsis Description

PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.