Factsheet for TraesCS5B01G188700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G240200.1
TraesCS2A01G327000.1
TraesCS2B01G257800.1
TraesCS2B01G355000.6
TraesCS2D01G237900.1
TraesCS2D01G335900.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6A01G208300.2
TraesCS6B01G236800.1
TraesCS6D01G191900.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01300.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT3G01300.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT3G01300.1	TraesCS3D01G299200.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS2A01G327000.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS2B01G355000.6	AT4G24690.1	21798944
AT5G15080.1	TraesCS2D01G335900.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS6A01G208300.2	AT4G24690.1	21798944
AT5G15080.1	TraesCS6B01G236800.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS6D01G191900.3	AT4G24690.1	21798944
AT5G15080.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS3D01G299200.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G195800.2	Wheat	cytosol	95.93	99.2
TraesCS5A01G193300.2	Wheat	cytosol	95.93	99.2
Os09t0361100-01	Rice	cytosol, plasma membrane	70.35	94.53
HORVU5Hr1G056920.1	Barley	cytosol	94.96	93.51
EER96629	Sorghum	cytosol	87.21	89.82
Zm00001d020213_P003	Maize	cytosol	86.82	88.89
Zm00001d005647_P002	Maize	cytosol	87.02	88.74
GSMUA_AchrUn_...	Banana	plastid	66.86	79.31
PGSC0003DMT400045429	Potato	cytosol	69.38	75.05
Solyc05g007050.2.1	Tomato	cytosol	69.38	74.9
VIT_01s0026g01620.t01	Wine grape	cytosol	69.77	74.84
TraesCS3B01G241300.1	Wheat	cytosol	69.19	74.84
PGSC0003DMT400002229	Potato	cytosol	69.57	74.48
Solyc01g010780.2.1	Tomato	cytosol	69.19	74.22
KRG99168	Soybean	nucleus	69.57	73.72
KRH45845	Soybean	nucleus	69.19	73.31
KRH74775	Soybean	cytosol	68.41	71.89
KRH69360	Soybean	cytosol	68.22	69.29
KRH01126	Soybean	cytosol	62.4	67.93
KRH40135	Soybean	cytosol	62.4	67.93
AT5G15080.1	Thale cress	cytosol	64.73	67.75
Bra040508.1-P	Field mustard	nucleus	62.98	67.01
CDY28689	Canola	nucleus	62.98	66.74
CDY59664	Canola	cytosol	61.63	66.39
CDY49042	Canola	cytosol	62.02	66.25
AT3G01300.1	Thale cress	nucleus	62.79	66.12
Bra039129.1-P	Field mustard	nucleus	62.21	66.05
CDY37534	Canola	nucleus	62.4	65.98
Bra006278.1-P	Field mustard	nucleus	63.18	64.68
CDX78606	Canola	nucleus	63.18	64.68
CDX70589	Canola	nucleus	63.18	64.68
KRG93494	Soybean	cytosol	60.66	64.27
AT3G28690.2	Thale cress	cytosol	59.11	64.08
Bra033053.1-P	Field mustard	cytosol	58.33	63.91
CDY47249	Canola	cytosol	57.95	63.48
CDY04026	Canola	cytosol	57.56	62.66
TraesCS7B01G031900.1	Wheat	mitochondrion	48.26	60.14
TraesCS4B01G207500.1	Wheat	plastid	43.41	60.05
TraesCS7B01G448200.1	Wheat	cytosol	40.7	59.32
TraesCS1B01G038800.1	Wheat	plastid	44.38	56.68
TraesCS3B01G600300.1	Wheat	plastid	44.96	54.08
TraesCS5B01G493500.1	Wheat	plastid	43.41	52.71
TraesCS4B01G287300.1	Wheat	plastid	41.86	51.31
TraesCS7B01G449500.1	Wheat	cytosol	33.72	50.14
TraesCS7B01G473700.1	Wheat	plastid	37.98	47.57
TraesCS2B01G114900.1	Wheat	plastid	36.43	45.85
TraesCS6B01G069800.1	Wheat	plastid	38.57	45.64
TraesCS2B01G422500.1	Wheat	cytosol	37.6	42.83
TraesCS6B01G271700.1	Wheat	cytosol	37.21	41.74
TraesCS6B01G069300.1	Wheat	cytosol	30.23	41.49
TraesCS2B01G052500.1	Wheat	cytosol	36.82	41.13
CDY00122	Canola	cytosol	56.59	39.73
Bra039049.1-P	Field mustard	cytosol	55.04	36.36
CDY65043	Canola	cytosol	62.98	20.56
Bra008726.1-P	Field mustard	cytosol	62.98	20.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF504	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5B01G188700	EnsemblPlants:TraesCS5B01G188700.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr5B:+:340626062..340631346

Molecular Weight (calculated)

56787.2 Da

IEP (calculated)

9.778

GRAVY (calculated)

-0.587

Length

516 amino acids

Sequence
(BLAST)

001: MGLAPPELGQ FDGWESSGEE ERERWGWCRR SRSSSSSRRG RRLPRKGGEE DAGVATGCCI RLWPMGNCPP QPRSKVDTST SSASTHGAEK SAENGSRNQP
101: VVSVVSGSTS TSNAESSSSA SKAAEEIKVS SKLRKFGFSD LKCATRNFRP ESLLGEGGFG CVFKGWIEEN GTAPVKPGTG LTVAVKTLNH DGLQGHKEWV
201: AEVDFLGNLH HPNLVKLIGY CVEDDQRLLV YEFMPRGSLD NHLFRRSLPL PWSIRMKVAL GAAQGLSFLH EEAERPVIYR DFKTSNILLD SEYNAKLSDF
301: GLAKDGPVGD KTHVSTRVMG TYGYAAPEYV MTGHLTSKSD VYSFGVVLLE MMSGRRSMDK NRPNGEHNLV EGARPNGEHN LVEWARPLLG ERQRFYKLVD
401: PRLEGNFSVK GAQKAAQLAR ACLSRDPKAR PLMSQVVEAL KPLLNLKDMA SSSYFYQTMQ AERMAHSSSM NGRNSHSLKV HGSFARASAN GHQSMRSMSD
501: GPRASPFRYS PKPNVK

Best Arabidopsis Sequence Match ( AT3G01300.1 )
(BLAST)

001: MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS STSDVETSLT LSTSTVGSQS AIVQSNDQPV GPVSSTTTTS
101: NAESSLSTPI ISEELNIYSH LKKFSFIDLK LATRNFRPES LLGEGGFGCV FKGWVEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INYLGNLLHP
201: NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIALGA AKGLSFLHEE ALKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEGKT
301: HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSVKGAQK VTQLAAQCLS
401: RDSKIRPKMS EVVEVLKPLP HLKDMASASY YFQTMQAERL KAGSGSGSGR GFGSRNGQPV FRTLSSPHGQ AGSSPYRHQI PSPKPKGATT

Arabidopsis Description

Receptor-like serine/threonine-protein kinase At3g01300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.