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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX92969
CDX94878
CDY02176
CDY23090
CDY35484
CDY40829

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G01300.1 CDX92969 AT3G22960.1 21798944
AT3G01300.1 CDX94878 AT3G22960.1 21798944
AT3G01300.1 CDY35484 AT3G22960.1 21798944
AT3G01300.1 CDY40829 AT3G22960.1 21798944
AT3G01300.1 CDY02176 AT5G61010.1 21798944
AT3G01300.1 CDY23090 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040508.1-P Field mustard nucleus 98.36 98.76
CDY49042 Canola cytosol 90.76 91.51
CDY37534 Canola nucleus 91.58 91.39
AT3G01300.1 Thale cress nucleus 90.35 89.8
CDX70589 Canola nucleus 84.6 81.75
CDX78606 Canola nucleus 84.19 81.35
CDY59664 Canola cytosol 78.23 79.54
Os09t0361100-01 Rice cytosol, plasma membrane 59.34 75.26
GSMUA_AchrUn_... Banana plastid 66.53 74.48
Solyc05g007050.2.1 Tomato cytosol 72.07 73.43
PGSC0003DMT400045429 Potato cytosol 71.66 73.17
PGSC0003DMT400002229 Potato cytosol 71.87 72.61
Solyc01g010780.2.1 Tomato cytosol 70.84 71.73
CDY47249 Canola cytosol 66.53 68.79
CDY04026 Canola cytosol 66.32 68.14
KRH01126 Soybean cytosol 65.09 66.88
KRH40135 Soybean cytosol 65.09 66.88
TraesCS3B01G241300.1 Wheat cytosol 65.09 66.46
TraesCS3A01G210700.1 Wheat cytosol 64.89 66.25
TraesCS3D01G213600.1 Wheat cytosol 64.68 66.04
TraesCS5A01G193300.2 Wheat cytosol 66.94 65.33
TraesCS5D01G195800.2 Wheat cytosol 66.94 65.33
HORVU3Hr1G051080.3 Barley cytosol 65.3 65.03
Os01t0588500-01 Rice plasma membrane 65.91 64.98
KRG93494 Soybean cytosol 64.48 64.48
EES03187 Sorghum cytosol 64.48 63.82
EER96629 Sorghum cytosol 65.5 63.67
Zm00001d020213_P003 Maize cytosol 65.3 63.1
TraesCS5B01G188700.1 Wheat cytosol 66.74 62.98
Zm00001d044324_P001 Maize cytosol 64.48 62.55
Zm00001d005647_P002 Maize cytosol 64.48 62.06
HORVU5Hr1G056920.1 Barley cytosol 66.74 62.02
CDY10453 Canola plastid 44.15 55.13
CDY40347 Canola plastid 43.74 54.62
CDY48100 Canola plastid 42.92 53.87
CDY04848 Canola plastid 42.51 53.35
CDY02940 Canola cytosol 38.19 53.14
CDY09904 Canola plastid 43.94 52.71
CDX80814 Canola plastid 42.3 52.69
CDY55560 Canola plastid 42.3 52.69
CDX76093 Canola cytosol, plastid 37.78 52.57
CDX93249 Canola plastid 41.27 52.48
CDY06271 Canola plastid 43.74 52.46
CDY06715 Canola plastid 43.94 52.45
CDY07022 Canola plastid 40.86 52.23
CDX95143 Canola plastid 43.74 52.21
CDY39519 Canola cytosol 41.89 51.52
CDX74847 Canola cytosol 40.04 51.05
CDY20465 Canola cytosol 40.45 51.04
CDX77220 Canola cytosol, plastid 43.74 50.96
CDY31741 Canola cytosol, plastid 43.74 50.96
CDY47885 Canola plastid 42.92 50.61
CDY45196 Canola plastid 44.35 50.59
CDY24954 Canola plastid 40.66 50.38
CDY07643 Canola plastid 40.66 50.38
CDY40221 Canola plastid 39.63 50.26
CDY52768 Canola plastid 41.07 50.25
CDY49086 Canola cytosol, plastid 42.71 49.52
CDX83305 Canola plastid 41.07 49.51
CDY38760 Canola plastid 40.04 49.49
CDY11655 Canola plastid 40.04 49.49
CDX81634 Canola plastid 43.53 49.42
CDY53554 Canola plastid 43.53 49.42
CDX95754 Canola plastid 40.86 49.26
CDY03036 Canola plastid 44.56 49.09
CDY39318 Canola cytosol, plastid 42.3 48.93
CDY46426 Canola plastid 41.07 48.78
CDY41675 Canola plastid 44.15 48.42
CDY67404 Canola plastid 44.15 48.31
CDX71350 Canola plastid 39.01 46.34
CDY31372 Canola plastid 39.01 46.34
CDY47489 Canola plastid 38.4 45.39
CDY40618 Canola plastid 35.93 44.99
CDY26797 Canola plastid 38.4 44.95
CDX69153 Canola plastid 38.6 43.72
CDY24815 Canola plastid 37.78 43.6
CDY41645 Canola plastid 37.78 43.6
CDX72550 Canola plastid 34.91 43.37
CDX75515 Canola plastid 37.99 43.33
CDY00122 Canola cytosol 65.3 43.27
CDY24816 Canola cytosol, plastid 32.24 42.78
CDX72549 Canola plastid 37.99 42.53
CDY40619 Canola plastid 37.58 42.07
CDX85943 Canola plastid 36.76 40.77
CDX68102 Canola plastid 36.76 40.41
CDX87609 Canola cytosol 36.96 40.09
CDX88265 Canola cytosol 36.55 39.91
CDY65043 Canola cytosol 79.47 24.48
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078GU32UniProt:A0A078GU32EnsemblPlants:CDY28689
ProteinID:CDY28689ProteinID:CDY28689.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00041319001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF07714PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF266InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDD382SEG:seg::
Description
BnaCnng05750DBnaCnng05750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU32]
Coordinates
chrLK032225:+:246139..248394
Molecular Weight (calculated)
54158.8 Da
IEP (calculated)
9.922
GRAVY (calculated)
-0.497
Length
487 amino acids
Sequence
(BLAST)
001: MSLDSVKVME DWQSNRSNEL YKRNKKKKKK NNVRNSDGQE EEANGGCWVK LRVMLCCVAS TSDVHSSLSL STTTVGSKSP ILKSNDQPAG PVSSTTTTSN
101: AESSLSTPMI SEELKIYSHL KKFSFLDLKL ATRNFRPESL LGEGGFGCVF KGWVEENGTA PVKPGTGLTV AVKTLNPDGL QGHKEWLAEI NYLGNLLHPN
201: LVKLVGYCIE DDQRLLVYEF MPRGSLENHL FRRSLPLPWS IRMRIALGAA NGLSFLHEEA LKPVIYRDFK TSNILLDSDY NAKLSDFGLA KDAPDEGKTH
301: VSTRVMGTYG YAAPEYVMTG HLTSKSDVYS FGVVLLEMLT GRRSMDKNRP NGEHNLVEWA RPHLLDRRRF YRLLDPRLEG HFSIKGAQKV TQLAAQCLSR
401: DSKIRPKMSE VVEVLKPLPH LKDMASSSYY FQTMQAERLK AGSGSGRGFG SRNGQLVFRT QSSPHGQAGS SPYRHQVPTP KPKGATT
Best Arabidopsis Sequence Match ( AT3G01300.1 )
(BLAST)
001: MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS STSDVETSLT LSTSTVGSQS AIVQSNDQPV GPVSSTTTTS
101: NAESSLSTPI ISEELNIYSH LKKFSFIDLK LATRNFRPES LLGEGGFGCV FKGWVEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INYLGNLLHP
201: NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIALGA AKGLSFLHEE ALKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEGKT
301: HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSVKGAQK VTQLAAQCLS
401: RDSKIRPKMS EVVEVLKPLP HLKDMASASY YFQTMQAERL KAGSGSGSGR GFGSRNGQPV FRTLSSPHGQ AGSSPYRHQI PSPKPKGATT
Arabidopsis Description
Receptor-like serine/threonine-protein kinase At3g01300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.