CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06715	Canola	plastid	99.02	99.02
Bra015592.1-P	Field mustard	plastid	75.74	98.1
CDY09904	Canola	plastid	92.4	92.86
CDY06271	Canola	plastid	91.42	91.87
AT1G07570.3	Thale cress	plastid	89.71	86.94
CDY31741	Canola	cytosol, plastid	83.09	81.1
CDX77220	Canola	cytosol, plastid	83.09	81.1
CDY39519	Canola	cytosol	75.74	78.03
CDY47885	Canola	plastid	78.19	77.24
CDX95754	Canola	plastid	73.04	73.76
CDX83305	Canola	plastid	72.79	73.51
PGSC0003DMT400011261	Potato	plastid	71.32	72.57
Solyc06g005500.2.1	Tomato	nucleus	71.08	71.25
KRH23073	Soybean	cytosol, plastid	73.04	71.12
KRH10259	Soybean	plastid	72.06	68.21
VIT_06s0004g04810.t01	Wine grape	plastid	72.3	66.74
CDY40347	Canola	plastid	62.75	65.64
CDY48100	Canola	plastid	62.01	65.21
CDY10453	Canola	plastid	62.01	64.87
CDY04848	Canola	plastid	61.52	64.69
CDY55560	Canola	plastid	61.27	63.94
CDX80814	Canola	plastid	61.27	63.94
KRH29797	Soybean	plastid	63.97	63.35
CDX76093	Canola	cytosol, plastid	51.72	60.29
CDX74847	Canola	cytosol	56.37	60.21
CDY02940	Canola	cytosol	51.47	60.0
CDY07022	Canola	plastid	55.88	59.84
CDX93249	Canola	plastid	55.64	59.27
CDY07643	Canola	plastid	56.86	59.03
CDY20465	Canola	cytosol	55.64	58.81
CDY24954	Canola	plastid	56.62	58.78
CDY40221	Canola	plastid	54.41	57.81
CDY49086	Canola	cytosol, plastid	58.09	56.43
CDY39318	Canola	cytosol, plastid	57.84	56.06
KRH24792	Soybean	cytosol, plastid	63.24	55.72
CDY11655	Canola	plastid	53.43	55.33
CDY38760	Canola	plastid	53.19	55.08
CDY52768	Canola	plastid	53.68	55.03
CDY53554	Canola	plastid	57.84	55.01
CDX81634	Canola	plastid	57.6	54.78
CDY45196	Canola	plastid	56.13	53.63
CDY46426	Canola	plastid	53.43	53.17
CDY41675	Canola	plastid	57.35	52.7
CDY67404	Canola	plastid	57.35	52.58
CDY03036	Canola	plastid	56.62	52.26
CDY31372	Canola	plastid	51.96	51.71
CDX71350	Canola	plastid	51.72	51.46
CDY47489	Canola	plastid	50.98	50.49
CDY26797	Canola	plastid	50.98	50.0
CDY40618	Canola	plastid	45.34	47.56
CDX72550	Canola	plastid	44.61	46.43
CDX75515	Canola	plastid	47.79	45.67
CDX69153	Canola	plastid	48.04	45.58
CDY47249	Canola	cytosol	52.45	45.44
CDY24815	Canola	plastid	46.81	45.26
CDY41645	Canola	plastid	46.81	45.26
CDY04026	Canola	cytosol	52.21	44.94
CDY49042	Canola	cytosol	53.19	44.93
CDY24816	Canola	cytosol, plastid	40.2	44.69
CDY37534	Canola	nucleus	53.19	44.47
CDX72549	Canola	plastid	47.3	44.37
CDY40619	Canola	plastid	47.06	44.14
CDY59664	Canola	cytosol	51.47	43.84
CDY28689	Canola	nucleus	52.21	43.74
CDX85943	Canola	plastid	46.57	43.28
CDX68102	Canola	plastid	46.81	43.12
CDX87609	Canola	cytosol	47.3	42.98
CDX88265	Canola	cytosol	46.81	42.83
CDX78606	Canola	nucleus	52.45	42.46
CDX70589	Canola	nucleus	52.21	42.26
CDY00122	Canola	cytosol	51.47	28.57
CDY65043	Canola	cytosol	53.19	13.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:A0A078E717	EnsemblPlants:CDX95143
ProteinID:CDX95143	ProteinID:CDX95143.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00100693001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE478E	SEG:seg	:	:	:

Description

BnaC05g05280D

Coordinates

chrLK031886:+:1370234..1372673

Molecular Weight (calculated)

45280.2 Da

IEP (calculated)

9.911

GRAVY (calculated)

-0.370

Length

408 amino acids

Sequence
(BLAST)

001: MGACLSAQVK AESPGASPKF KDTGSLGSKG SSVSVRPTPR TEGEILQSPN LKSFSFAELK SATRNFRPDS VLGEGGFGCV FKGWIDEKSL TATKPGTGLV
101: IAVKKLNQDG WQGHQEWLAE VNYLGQFSHG HLVKLIGYCL EDEHRLLVYE FMPRGSLENH LFRRGLYFQS LSWKLRLKVA LGAAKGLAFL HSSETRVIYR
201: DFKTSNILLD SEYNAKLSDF GLAKDGPVGD ESHVSTRVMG THGYAAPEYL ATGHLTTKSD VYSFGVVLLE LLSGRRAMDR NRPSGERNLV EWAKPYLANK
301: RKIFRVVDNR LQDQYSMEEA CKVATLSLRC LTTEIKLRPD MKEVVSQLEH IQSLNASRGG NVDRTERRVR RRSDSVVTKK PDAGFVRQTA VGCTVVAYPR
401: PSASPLYV

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.