Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09904 | Canola | plastid | 88.12 | 91.38 |
| CDY06271 | Canola | plastid | 86.94 | 90.15 |
| Bra031585.1-P | Field mustard | plastid | 86.94 | 90.15 |
| CDY06715 | Canola | plastid | 86.94 | 89.71 |
| CDX95143 | Canola | plastid | 86.94 | 89.71 |
| Bra015592.1-P | Field mustard | plastid | 64.61 | 86.35 |
| AT2G28930.1 | Thale cress | plasma membrane | 81.0 | 80.61 |
| PGSC0003DMT400011261 | Potato | plastid | 66.98 | 70.32 |
| KRH23073 | Soybean | cytosol, plastid | 68.65 | 68.97 |
| Solyc06g005500.2.1 | Tomato | nucleus | 66.51 | 68.8 |
| KRH10259 | Soybean | plastid | 67.7 | 66.13 |
| VIT_06s0004g04810.t01 | Wine grape | plastid | 68.65 | 65.38 |
| AT5G02290.1 | Thale cress | plastid | 59.86 | 64.78 |
| KRH29797 | Soybean | plastid | 61.28 | 62.62 |
| AT2G39660.1 | Thale cress | plastid | 54.39 | 57.97 |
| KRH24792 | Soybean | cytosol, plastid | 61.05 | 55.51 |
| AT1G69790.1 | Thale cress | plastid | 50.36 | 54.78 |
| AT2G02800.1 | Thale cress | plastid | 55.34 | 54.69 |
| AT1G14370.1 | Thale cress | plastid | 53.68 | 53.05 |
| AT1G26970.1 | Thale cress | plastid | 51.78 | 52.91 |
| AT3G55450.2 | Thale cress | plasma membrane, plastid | 52.26 | 51.64 |
| AT2G17220.1 | Thale cress | plastid | 49.17 | 50.0 |
| AT4G35600.2 | Thale cress | plastid | 45.37 | 45.48 |
| AT3G28690.2 | Thale cress | cytosol | 50.12 | 44.33 |
| AT3G01300.1 | Thale cress | nucleus | 51.54 | 44.29 |
| AT5G15080.1 | Thale cress | cytosol | 50.83 | 43.41 |
| AT1G76360.1 | Thale cress | plastid | 46.56 | 40.5 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.37.1 | MapMan:26.8.1.1.3 | Gene3D:3.30.200.20 | EntrezGene:837271 | ProteinID:AEE28145.2 |
| Symbol:APK1A | ArrayExpress:AT1G07570 | EnsemblPlantsGene:AT1G07570 | RefSeq:AT1G07570 | TAIR:AT1G07570 | RefSeq:AT1G07570-TAIR-G |
| EnsemblPlants:AT1G07570.3 | TAIR:AT1G07570.3 | Unigene:At.348 | UniProt:F4HQQ0 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_001318944.1 | PFAM:PF07714 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 |
| PANTHER:PTHR27001:SF191 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0008484B9B | SEG:seg | : | : | : | : |
Description
APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
Coordinates
chr1:-:2331186..2333738
Molecular Weight (calculated)
47021.5 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.315
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFPITNYEP SRRNLLASVP LLFCQGASTK YDAKDIGSLG SKASSVSVRP SPRTEGEILQ SPNLKSFSFA ELKSATRNFR PDSVLGEGGF GCVFKGWIDE
101: KSLTASRPGT GLVIAVKKLN QDGWQGHQEW LAEVNYLGQF SHRHLVKLIG YCLEDEHRLL VYEFMPRGSL ENHLFRRGLY FQPLSWKLRL KVALGAAKGL
201: AFLHSSETRV IYRDFKTSNI LLDSEYNAKL SDFGLAKDGP IGDKSHVSTR VMGTHGYAAP EYLATGHLTT KSDVYSFGVV LLELLSGRRA VDKNRPSGER
301: NLVEWAKPYL VNKRKIFRVI DNRLQDQYSM EEACKVATLS LRCLTTEIKL RPNMSEVVSH LEHIQSLNAA IGGNMDKTDR RMRRRSDSVV SKKVNAGFAR
401: QTAVGSTVVA YPRPSASPLY V
101: KSLTASRPGT GLVIAVKKLN QDGWQGHQEW LAEVNYLGQF SHRHLVKLIG YCLEDEHRLL VYEFMPRGSL ENHLFRRGLY FQPLSWKLRL KVALGAAKGL
201: AFLHSSETRV IYRDFKTSNI LLDSEYNAKL SDFGLAKDGP IGDKSHVSTR VMGTHGYAAP EYLATGHLTT KSDVYSFGVV LLELLSGRRA VDKNRPSGER
301: NLVEWAKPYL VNKRKIFRVI DNRLQDQYSM EEACKVATLS LRCLTTEIKL RPNMSEVVSH LEHIQSLNAA IGGNMDKTDR RMRRRSDSVV SKKVNAGFAR
401: QTAVGSTVVA YPRPSASPLY V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.