CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10259	Soybean	plastid	93.08	90.49
PGSC0003DMT400011261	Potato	plastid	74.7	78.05
Solyc06g005500.2.1	Tomato	nucleus	73.99	76.17
CDY06715	Canola	plastid	71.6	73.53
VIT_06s0004g04810.t01	Wine grape	plastid	77.09	73.08
CDX95143	Canola	plastid	71.12	73.04
CDY06271	Canola	plastid	70.64	72.91
Bra031585.1-P	Field mustard	plastid	70.64	72.91
CDY09904	Canola	plastid	70.17	72.41
KRH15106	Soybean	cytosol	2.86	70.59
Bra040929.1-P	Field mustard	plastid	69.45	70.46
CDY47885	Canola	plastid	69.45	70.46
KRH29797	Soybean	plastid	68.97	70.15
CDX77220	Canola	cytosol, plastid	69.93	70.1
CDY31741	Canola	cytosol, plastid	69.93	70.1
CDY39519	Canola	cytosol	65.39	69.19
Bra035659.1-P	Field mustard	cytosol, plastid	68.74	68.9
Bra015592.1-P	Field mustard	plastid	51.79	68.89
KRG99951	Soybean	plastid	67.3	68.78
AT1G07570.3	Thale cress	plastid	68.97	68.65
KRH73031	Soybean	plastid	63.72	68.11
AT2G28930.1	Thale cress	plasma membrane	68.74	68.09
KRH49102	Soybean	plastid	66.59	68.05
KRG97912	Soybean	cytosol	62.29	67.62
CDX95754	Canola	plastid	65.16	67.57
KRH75643	Soybean	plastid	66.59	67.55
KRH65832	Soybean	plastid	66.59	67.39
CDX83305	Canola	plastid	64.92	67.33
KRH15105	Soybean	cytosol, nucleus	60.62	66.67
KRH24792	Soybean	cytosol, plastid	67.3	60.91
KRH74810	Soybean	cytosol, plastid	57.28	58.39
KRH69316	Soybean	cytosol, plastid	57.28	58.39
KRH45870	Soybean	plastid	55.37	57.71
KRG99134	Soybean	plastid	55.85	56.25
KRH07892	Soybean	cytosol	34.61	55.56
Bra000478.1-P	Field mustard	cytosol, mitochondrion	63.48	55.42
KRH28911	Soybean	plastid	46.06	52.73
KRH18652	Soybean	plastid	47.73	52.36
KRH56930	Soybean	cytosol	47.97	50.25
KRH14658	Soybean	plastid	46.3	49.87
KRH14015	Soybean	plastid	48.93	49.76
KRH60921	Soybean	cytosol	43.91	49.73
KRH51603	Soybean	mitochondrion, plastid	43.68	49.59
KRH74099	Soybean	plastid	48.69	49.51
KRH20145	Soybean	cytosol	50.84	48.74
KRH03664	Soybean	cytosol	50.84	48.41
KRH39445	Soybean	plastid	45.82	48.36
KRH40135	Soybean	cytosol	53.7	47.47
KRH01126	Soybean	cytosol	53.7	47.47
KRG99168	Soybean	nucleus	54.89	47.23
KRH28912	Soybean	plastid	45.58	47.16
KRH45845	Soybean	nucleus	53.94	46.41
KRG89785	Soybean	plasma membrane, vacuole	47.02	46.35
KRH74775	Soybean	cytosol	53.94	46.03
KRG93494	Soybean	cytosol	52.51	45.17
KRH69360	Soybean	cytosol	53.94	44.49
KRH07902	Soybean	plastid	40.57	43.93
KRH07906	Soybean	plastid	43.44	43.65
KRH07896	Soybean	plastid	42.72	36.98

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100788856	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EMBL:ACUP02008457
UniProt:C6ZRV5	EMBL:FJ014796	EnsemblPlantsGene:GLYMA_13G336300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
EnsemblPlants:KRH23073	ProteinID:KRH23073	ProteinID:KRH23073.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001B07099	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:42970095..42973207

Molecular Weight (calculated)

46480.2 Da

IEP (calculated)

10.036

GRAVY (calculated)

-0.439

Length

419 amino acids

Sequence
(BLAST)

001: MGVCLSAQIK AESPFNTVFN SKYVSTDGND LGSTNDKVSA NSVPQTPRSE GEILQSSNLK SFTLSELKTA TRNFRPDSVL GEGGFGSVFK GWIDENSLTA
101: TKPGTGIVIA VKRLNQDGIQ GHREWLAEVN YLGQLSHPHL VRLIGFCLED EHRLLVYEFM PRGSLENHLF RRGSYFQPLS WSLRLKVALD AAKGLAFLHS
201: AEAKVIYRDF KTSNVLLDSK YNAKLSDFGL AKDGPTGDKS HVSTRVMGTY GYAAPEYLAT GHLTAKSDVY SFGVVLLEML SGKRAVDKNR PSGQHNLVEW
301: AKPFMANKRK IFRVLDTRLQ GQYSTDDAYK LATLALRCLS IESKFRPNMD QVVTTLEQLQ LSNVNGGPRV RRRSADVNRG HQNPSSVNGS RVRRRSADDI
401: SRLETPNAYP RPSASPLYT

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.