CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29797	Soybean	plastid	80.78	90.78
KRH23073	Soybean	cytosol, plastid	60.91	67.3
PGSC0003DMT400011261	Potato	plastid	57.88	66.83
Solyc06g005500.2.1	Tomato	nucleus	57.67	65.6
KRH10259	Soybean	plastid	60.48	64.97
VIT_06s0004g04810.t01	Wine grape	plastid	61.34	64.25
CDY06715	Canola	plastid	55.94	63.48
CDX95143	Canola	plastid	55.72	63.24
CDY09904	Canola	plastid	55.29	63.05
Bra031585.1-P	Field mustard	plastid	54.64	62.32
CDY06271	Canola	plastid	54.64	62.32
Bra040929.1-P	Field mustard	plastid	55.08	61.74
CDY47885	Canola	plastid	55.08	61.74
KRG97912	Soybean	cytosol	51.19	61.4
CDY39519	Canola	cytosol	52.48	61.36
KRH73031	Soybean	plastid	51.84	61.22
KRH15105	Soybean	cytosol, nucleus	50.32	61.15
AT1G07570.3	Thale cress	plastid	55.51	61.05
KRG99951	Soybean	plastid	54.0	60.98
KRH65832	Soybean	plastid	54.43	60.87
KRH75643	Soybean	plastid	54.0	60.53
CDX77220	Canola	cytosol, plastid	54.64	60.53
CDY31741	Canola	cytosol, plastid	54.64	60.53
KRH49102	Soybean	plastid	53.35	60.24
AT2G28930.1	Thale cress	plasma membrane	54.86	60.05
Bra035659.1-P	Field mustard	cytosol, plastid	53.56	59.33
CDX95754	Canola	plastid	51.4	58.91
CDX83305	Canola	plastid	51.19	58.66
Bra015592.1-P	Field mustard	plastid	38.01	55.87
KRH07892	Soybean	cytosol	31.1	55.17
KRH74810	Soybean	cytosol, plastid	47.73	53.77
KRH69316	Soybean	cytosol, plastid	47.73	53.77
KRH45870	Soybean	plastid	46.0	52.99
KRG99134	Soybean	plastid	46.44	51.68
KRH28911	Soybean	plastid	40.39	51.09
KRH18652	Soybean	plastid	40.6	49.21
KRH56930	Soybean	cytosol	42.12	48.75
Bra000478.1-P	Field mustard	cytosol, mitochondrion	50.11	48.33
KRH60921	Soybean	cytosol	38.44	48.11
KRH51603	Soybean	mitochondrion, plastid	38.23	47.97
KRH74099	Soybean	plastid	42.55	47.82
KRH14015	Soybean	plastid	42.33	47.57
KRH14658	Soybean	plastid	39.74	47.3
KRH39445	Soybean	plastid	40.39	47.1
KRH28912	Soybean	plastid	39.52	45.19
KRH20145	Soybean	cytosol	42.33	44.85
KRH01126	Soybean	cytosol	45.57	44.51
KRH03664	Soybean	cytosol	42.12	44.32
KRH40135	Soybean	cytosol	45.36	44.3
KRG89785	Soybean	plasma membrane, vacuole	40.17	43.76
KRG99168	Soybean	nucleus	46.0	43.74
KRH07902	Soybean	plastid	36.29	43.41
KRH45845	Soybean	nucleus	45.36	43.12
KRH74775	Soybean	cytosol	45.57	42.97
KRH07906	Soybean	plastid	38.66	42.93
KRG93494	Soybean	cytosol	43.84	41.68
KRH69360	Soybean	cytosol	45.57	41.54
KRH07896	Soybean	plastid	37.8	36.16
KRH15106	Soybean	cytosol	1.3	35.29

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100812366	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02007186	UniProt:C6ZRU9
EMBL:FJ014790	EnsemblPlantsGene:GLYMA_12G062900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	EnsemblPlants:KRH24792	ProteinID:KRH24792
ProteinID:KRH24792.1	ProteinID:KRH24793.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000189CFFD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:4607353..4610322

Molecular Weight (calculated)

50910.8 Da

IEP (calculated)

8.787

GRAVY (calculated)

-0.325

Length

463 amino acids

Sequence
(BLAST)

001: MGICLSTQIE AGLNSKHVSV DAKDLSSPSS KITKDLSNPI SNKITEDLST PISNKITEDL STPISNKITE DLSTPISNKI TEDLSTPISK VSEILVPLTP
101: QIEGEILQSS NLKNFSLTEL TAATRNFRKD SVLGGEGDFG SVFKGWIDNH SLAAAKPGTG VVVAVKRLSL DSFQGHKDRL ARHGMTHEAS LEAEVNYLGQ
201: LSHPHLVKLI GYCFEDKDRL LVYEFMPRGS LENHLFMRGS YFQPLSWGLR LKVALGAAKG LAFLHSAETK VIYRDFKTSN VLLDSNYNAK LADLGLAKDG
301: PTREKSHAST RVMGTYGYAA PEYLATGNLS AKSDVFSFGV VLLEMLSGRR AVDKNRPSGQ HNLVEWAKPY LSNKRKLLRV LDNRLEGQYE LDEACKVATL
401: SLRCLAIESK LRPTMDEVAT DLEQLQVPHV KQNRRKSADH FTHGRIATAS ASPLSRDIAN THP

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.