Factsheet for Bra035659.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 6
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77220	Canola	cytosol, plastid	98.56	98.56
CDY31741	Canola	cytosol, plastid	98.33	98.33
Bra040929.1-P	Field mustard	plastid	88.04	89.1
AT2G28930.1	Thale cress	plasma membrane	85.41	84.4
Bra031585.1-P	Field mustard	plastid	79.19	81.53
Bra015592.1-P	Field mustard	plastid	59.81	79.37
PGSC0003DMT400011261	Potato	plastid	66.51	69.33
KRH23073	Soybean	cytosol, plastid	68.9	68.74
Solyc06g005500.2.1	Tomato	nucleus	66.27	68.06
Bra000478.1-P	Field mustard	cytosol, mitochondrion	76.56	66.67
Bra028877.1-P	Field mustard	cytosol	55.5	66.48
KRH10259	Soybean	plastid	68.18	66.13
VIT_06s0004g04810.t01	Wine grape	plastid	69.14	65.38
Bra009599.1-P	Field mustard	plastid	60.29	64.78
Bra005716.1-P	Field mustard	plastid	58.61	62.66
KRH29797	Soybean	plastid	60.29	61.16
Bra017061.1-P	Field mustard	cytosol	49.76	58.76
Bra005027.1-P	Field mustard	cytosol	53.11	58.12
Bra000141.1-P	Field mustard	plastid	53.11	56.49
KRH24792	Soybean	cytosol, plastid	59.33	53.56
Bra016265.1-P	Field mustard	plastid	50.48	53.55
Bra019654.1-P	Field mustard	cytosol, plastid	53.35	53.1
Bra016301.1-P	Field mustard	plastid	50.96	51.95
Bra026834.1-P	Field mustard	plastid	53.11	51.63
Bra002031.1-P	Field mustard	plastid	49.28	50.24
Bra037280.1-P	Field mustard	plastid	47.61	48.54
Bra017725.1-P	Field mustard	plastid	43.06	46.27
Bra011627.1-P	Field mustard	plastid	44.5	46.04
Bra026580.1-P	Field mustard	plastid	53.59	45.9
Bra033053.1-P	Field mustard	cytosol	49.76	44.16
Bra039129.1-P	Field mustard	nucleus	51.2	44.03
Bra040508.1-P	Field mustard	nucleus	50.48	43.51
Bra017724.1-P	Field mustard	plastid	45.22	43.45
Bra010530.1-P	Field mustard	plastid	43.78	43.36
Bra008255.1-P	Field mustard	plastid	43.3	42.59
Bra006278.1-P	Field mustard	nucleus	50.96	42.26
Bra003724.1-P	Field mustard	plastid	44.02	41.16
Bra015757.1-P	Field mustard	cytosol, plastid	36.84	37.93
Bra039049.1-P	Field mustard	cytosol	49.04	26.25
Bra008726.1-P	Field mustard	cytosol	51.44	13.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra035659	EnsemblPlants:Bra035659.1
EnsemblPlants:Bra035659.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4F3K9	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002544221	SEG:seg	:	:	:

Description

AT2G28930 (E=2e-205) APK1B | APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA04:+:13021157..13023405

Molecular Weight (calculated)

46458.6 Da

IEP (calculated)

9.536

GRAVY (calculated)

-0.380

Length

418 amino acids

Sequence
(BLAST)

001: MGICLSAQIK AESPSNTGAS PKYMSSEAND TQSMGSKGSS VSIRTNPRTE GEILQSPNLK SFSVAEVKSE TRNFRPDIVL GEGGFGCVFK GWIYEQSLTA
101: SKPGTGMVIA VKRINQDGWQ GHQEWLAEVD YLGKFSHPNL VKLIGYCLED EQRLLVYEFM PRGSLENHLF RRGSYFEPLS WTLRLRVALG AAKGLAFLHN
201: AETQVIYRDF KTSNILIDSD YNPKLSDFGL AKDGPTGDKS HVSTRIMGTY GYAAPEYLMT GHLTTKSDVY SYGVVLLEIL SGRRVVDKNR PPGEQKLVDW
301: AKPLLANKRK IFRVIDNRLQ DQYSMEEACK VATLALRCLT TEIKLRPNMT EVVAHLEHIQ TLHETGGGRN IDKMERRTRR RSDSVVVSQK PNAGFARQSA
401: VGGIAAAYPR PSASPLFV

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.