Factsheet for Bra040929.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47885	Canola	plastid	100.0	100.0
Bra035659.1-P	Field mustard	cytosol, plastid	89.1	88.04
AT2G28930.1	Thale cress	plasma membrane	84.26	82.27
Bra031585.1-P	Field mustard	plastid	77.72	79.06
Bra015592.1-P	Field mustard	plastid	56.42	73.97
PGSC0003DMT400011261	Potato	plastid	68.52	70.57
KRH23073	Soybean	cytosol, plastid	70.46	69.45
Solyc06g005500.2.1	Tomato	nucleus	68.28	69.29
KRH10259	Soybean	plastid	69.98	67.05
Bra028877.1-P	Field mustard	cytosol	56.66	67.05
VIT_06s0004g04810.t01	Wine grape	plastid	70.46	65.84
Bra000478.1-P	Field mustard	cytosol, mitochondrion	76.27	65.62
Bra009599.1-P	Field mustard	plastid	61.5	65.3
Bra005716.1-P	Field mustard	plastid	59.81	63.17
KRH29797	Soybean	plastid	62.71	62.86
Bra017061.1-P	Field mustard	cytosol	51.82	60.45
Bra005027.1-P	Field mustard	cytosol	55.69	60.21
Bra000141.1-P	Field mustard	plastid	55.45	58.27
KRH24792	Soybean	cytosol, plastid	61.74	55.08
Bra019654.1-P	Field mustard	cytosol, plastid	55.21	54.29
Bra016265.1-P	Field mustard	plastid	50.85	53.3
Bra026834.1-P	Field mustard	plastid	54.48	52.33
Bra016301.1-P	Field mustard	plastid	51.09	51.46
Bra002031.1-P	Field mustard	plastid	50.36	50.73
Bra037280.1-P	Field mustard	plastid	49.15	49.51
Bra017725.1-P	Field mustard	plastid	45.76	48.59
Bra011627.1-P	Field mustard	plastid	45.76	46.78
Bra026580.1-P	Field mustard	plastid	55.21	46.72
Bra010530.1-P	Field mustard	plastid	46.49	45.5
Bra017724.1-P	Field mustard	plastid	46.73	44.37
Bra033053.1-P	Field mustard	cytosol	50.36	44.16
Bra008255.1-P	Field mustard	plastid	45.04	43.76
Bra039129.1-P	Field mustard	nucleus	51.33	43.62
Bra040508.1-P	Field mustard	nucleus	50.61	43.09
Bra006278.1-P	Field mustard	nucleus	52.06	42.66
Bra003724.1-P	Field mustard	plastid	44.55	41.16
Bra015757.1-P	Field mustard	cytosol, plastid	38.98	39.66
Bra039049.1-P	Field mustard	cytosol	50.36	26.63
Bra008726.1-P	Field mustard	cytosol	52.3	13.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra040929	EnsemblPlants:Bra040929.1
EnsemblPlants:Bra040929.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4FIK0	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253EAC2	:	:	:	:

Description

AT2G28930 (E=1e-202) APK1B | APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrScaffold000317:+:14180..16197

Molecular Weight (calculated)

45976.9 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.392

Length

413 amino acids

Sequence
(BLAST)

001: MGICLSAQIK AESPSNTGVS SKYMSSEAND SQSMGSKCSS ASIRTNPRTE GEILQSPNLK SFSLDELKSA TRNFRQDSVL GEGGFGCVFK GWIDEQSLAA
101: SKPGTGMVIA VKRLNQDGWQ GHQEWLAEVN YLGQFSHPNL VKLIGYCLED EHRLLVYEFM PRGSLENHLF RRGSYFQPLS WTLRLKVALG AAQGLAFLHN
201: AETQVIYRDF KTSNILIDAD YNAKLSDFGL AKDGPTGDKS HVSTRIMGTY GYAAPEYLLT GHLTTKSDVY SYGVVLLEIL SGLRVVDKNR PPGEQKLVDW
301: AKPLLANKRK LFKVIDNRLH DQYSMEEVCK VATLALRCLT TEIKMRPNMN EVVAHLQHIQ ALHEAGGGNN IDKEDKRMRR RSDSVLLLSQ KPNEGFARQT
401: AAYPRPSASH LFA

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.