Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39519 | Canola | cytosol | 82.03 | 87.63 |
| CDY31741 | Canola | cytosol, plastid | 85.82 | 86.84 |
| CDX77220 | Canola | cytosol, plastid | 85.82 | 86.84 |
| Bra035659.1-P | Field mustard | cytosol, plastid | 84.4 | 85.41 |
| CDY47885 | Canola | plastid | 82.27 | 84.26 |
| Bra040929.1-P | Field mustard | plastid | 82.27 | 84.26 |
| AT1G07570.3 | Thale cress | plastid | 80.61 | 81.0 |
| CDX95754 | Canola | plastid | 74.0 | 77.48 |
| CDX83305 | Canola | plastid | 73.76 | 77.23 |
| PGSC0003DMT400011261 | Potato | plastid | 65.72 | 69.33 |
| KRH23073 | Soybean | cytosol, plastid | 68.09 | 68.74 |
| Solyc06g005500.2.1 | Tomato | nucleus | 65.96 | 68.55 |
| AT5G02290.1 | Thale cress | plastid | 60.99 | 66.32 |
| KRH10259 | Soybean | plastid | 67.14 | 65.89 |
| VIT_06s0004g04810.t01 | Wine grape | plastid | 68.09 | 65.16 |
| Bra000478.1-P | Field mustard | cytosol, mitochondrion | 73.52 | 64.79 |
| KRH29797 | Soybean | plastid | 60.76 | 62.38 |
| AT2G39660.1 | Thale cress | plastid | 55.56 | 59.49 |
| AT2G02800.1 | Thale cress | plastid | 56.03 | 55.63 |
| KRH24792 | Soybean | cytosol, plastid | 60.05 | 54.86 |
| AT1G69790.1 | Thale cress | plastid | 49.17 | 53.75 |
| AT1G26970.1 | Thale cress | plastid | 52.01 | 53.4 |
| AT1G14370.1 | Thale cress | plastid | 53.19 | 52.82 |
| AT3G55450.2 | Thale cress | plasma membrane, plastid | 52.72 | 52.35 |
| AT2G17220.1 | Thale cress | plastid | 49.17 | 50.24 |
| AT4G35600.2 | Thale cress | plastid | 44.92 | 45.24 |
| AT3G28690.2 | Thale cress | cytosol | 50.59 | 44.96 |
| AT3G01300.1 | Thale cress | nucleus | 51.77 | 44.69 |
| AT5G15080.1 | Thale cress | cytosol | 51.54 | 44.22 |
| AT1G76360.1 | Thale cress | plastid | 45.86 | 40.08 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.37.1 | MapMan:26.8.1.1.3 | Gene3D:3.30.200.20 | EntrezGene:817442 | UniProt:A1L4W8 |
| ProteinID:AEC08189.1 | Symbol:APK1B | ArrayExpress:AT2G28930 | EnsemblPlantsGene:AT2G28930 | RefSeq:AT2G28930 | TAIR:AT2G28930 |
| RefSeq:AT2G28930-TAIR-G | EnsemblPlants:AT2G28930.1 | TAIR:AT2G28930.1 | EMBL:BT029755 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_180459.2 | PFAM:PF07714 | PIRSF:PIRSF000615 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF191 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000034EDBD | SEG:seg | : |
Description
APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
Coordinates
chr2:+:12424775..12426674
Molecular Weight (calculated)
47222.6 Da
IEP (calculated)
9.689
GRAVY (calculated)
-0.315
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMGFVEKVK SNVFLYANYV FGCCIGASPK YMSSEANDSL GSKSSSVSIR TNPRTEGEIL QSPNLKSFTF AELKAATRNF RPDSVLGEGG FGSVFKGWID
101: EQTLTASKPG TGVVIAVKKL NQDGWQGHQE WLAEVNYLGQ FSHPNLVKLI GYCLEDEHRL LVYEFMPRGS LENHLFRRGS YFQPLSWTLR LKVALGAAKG
201: LAFLHNAETS VIYRDFKTSN ILLDSEYNAK LSDFGLAKDG PTGDKSHVST RIMGTYGYAA PEYLATGHLT TKSDVYSYGV VLLEVLSGRR AVDKNRPPGE
301: QKLVEWARPL LANKRKLFRV IDNRLQDQYS MEEACKVATL ALRCLTFEIK LRPNMNEVVS HLEHIQTLNE AGGRNIDMVQ RRMRRRSDSV AINQKPNAGF
401: ARQTAVGVIA TAYPRPSDSP LFV
101: EQTLTASKPG TGVVIAVKKL NQDGWQGHQE WLAEVNYLGQ FSHPNLVKLI GYCLEDEHRL LVYEFMPRGS LENHLFRRGS YFQPLSWTLR LKVALGAAKG
201: LAFLHNAETS VIYRDFKTSN ILLDSEYNAK LSDFGLAKDG PTGDKSHVST RIMGTYGYAA PEYLATGHLT TKSDVYSYGV VLLEVLSGRR AVDKNRPPGE
301: QKLVEWARPL LANKRKLFRV IDNRLQDQYS MEEACKVATL ALRCLTFEIK LRPNMNEVVS HLEHIQTLNE AGGRNIDMVQ RRMRRRSDSV AINQKPNAGF
401: ARQTAVGVIA TAYPRPSDSP LFV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.