Factsheet for AT3G55450.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

endoplasmic reticulum 4
golgi 4
extracellular 4
plastid 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40221	Canola	plastid	78.64	87.24
CDX76093	Canola	cytosol, plastid	70.66	86.0
CDY02940	Canola	cytosol	70.42	85.71
AT2G39660.1	Thale cress	plastid	72.3	77.97
AT5G02290.1	Thale cress	plastid	52.11	57.07
AT1G69790.1	Thale cress	plastid	48.36	53.23
AT2G28930.1	Thale cress	plasma membrane	52.35	52.72
AT1G07570.3	Thale cress	plastid	51.64	52.26
AT2G02800.1	Thale cress	plastid	50.0	50.0
AT1G26970.1	Thale cress	plastid	47.65	49.27
AT1G14370.1	Thale cress	plastid	48.83	48.83
AT2G17220.1	Thale cress	plastid	44.84	46.14
AT4G35600.2	Thale cress	plastid	41.55	42.14
AT3G28690.2	Thale cress	cytosol	45.31	40.55
AT5G15080.1	Thale cress	cytosol	46.71	40.37
AT3G01300.1	Thale cress	nucleus	46.24	40.2
AT1G76360.1	Thale cress	plastid	41.55	36.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EntrezGene:824711	ProteinID:AEE79386.1
ArrayExpress:AT3G55450	EnsemblPlantsGene:AT3G55450	RefSeq:AT3G55450	TAIR:AT3G55450	RefSeq:AT3G55450-TAIR-G	EnsemblPlants:AT3G55450.2
TAIR:AT3G55450.2	UniProt:F4IWV6	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_001190097.1	Symbol:PBL1	PFAM:PF07714	PIRSF:PIRSF000615	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF124	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001E92E8A	SEG:seg

Description

PBL1PBS1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4IWV6]

Coordinates

chr3:+:20558102..20560096

Molecular Weight (calculated)

47348.0 Da

IEP (calculated)

9.143

GRAVY (calculated)

-0.074

Length

426 amino acids

Sequence
(BLAST)

001: MGSCLSSRVL STFSTILHLP FFFFFFFFPF FGVLSILTVV NAFVCCADKS SSGLDDLHLS SCKSSSSATA HKTEGEILSS TTVKSFSFNE LKLATRNFRS
101: DSVVGEGGFG CVFRGWLDET TLTPTKSSSG LVIAVKRLNP DGFQGHREWL TEINYLGQLS HPNLVKLIGY CLEDEQRLLV YEFMHKGSLE NHLFANGNKD
201: FKPLSWILRI KVALDAAKGL AFLHSDPVKV IYRDIKASNI LLDSDFNAKL SDFGLARDGP MGEQSYVSTR VMGTFGYAAP EYVSTGHLNA RSDVYSFGVV
301: LLELLCGRQA LDHNRPAKEQ NLVDWARPYL TSRRKVLLIV DTRLNSQYKP EGAVRLASIA VQCLSFEPKS RPTMDQVVRA LVQLQDSVVK PANVDPLKVK
401: DTKKLVGLKT EDKYQRNGLN KKTVGL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.