CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47885	Canola	plastid	96.46	92.49
CDX77220	Canola	cytosol, plastid	91.16	86.36
CDY31741	Canola	cytosol, plastid	91.16	86.36
AT2G28930.1	Thale cress	plasma membrane	87.63	82.03
CDY09904	Canola	plastid	79.55	77.59
CDY06271	Canola	plastid	78.79	76.85
CDX95754	Canola	plastid	77.53	75.99
CDX83305	Canola	plastid	77.27	75.74
CDY06715	Canola	plastid	78.03	75.74
CDX95143	Canola	plastid	78.03	75.74
PGSC0003DMT400011261	Potato	plastid	67.42	66.58
KRH23073	Soybean	cytosol, plastid	69.19	65.39
Solyc06g005500.2.1	Tomato	nucleus	67.17	65.36
KRH10259	Soybean	plastid	68.43	62.88
CDY48100	Canola	plastid	60.86	62.11
CDY10453	Canola	plastid	61.11	62.05
CDY04848	Canola	plastid	60.61	61.86
CDY40347	Canola	plastid	60.86	61.79
VIT_06s0004g04810.t01	Wine grape	plastid	68.94	61.76
CDY55560	Canola	plastid	59.85	60.61
CDX80814	Canola	plastid	59.85	60.61
KRH29797	Soybean	plastid	62.37	59.95
CDX74847	Canola	cytosol	55.81	57.85
CDX76093	Canola	cytosol, plastid	51.01	57.71
CDY02940	Canola	cytosol	50.76	57.43
CDY07022	Canola	plastid	54.8	56.96
CDY07643	Canola	plastid	56.31	56.74
CDY24954	Canola	plastid	56.06	56.49
CDX93249	Canola	plastid	54.55	56.4
CDY20465	Canola	cytosol	54.8	56.22
CDY40221	Canola	plastid	53.79	55.47
CDY49086	Canola	cytosol, plastid	55.81	52.62
KRH24792	Soybean	cytosol, plastid	61.36	52.48
CDY39318	Canola	cytosol, plastid	55.56	52.26
CDY53554	Canola	plastid	56.06	51.75
CDX81634	Canola	plastid	56.06	51.75
CDY45196	Canola	plastid	55.56	51.52
CDY11655	Canola	plastid	51.01	51.27
CDY38760	Canola	plastid	51.01	51.27
CDY52768	Canola	plastid	50.76	50.5
CDY41675	Canola	plastid	56.31	50.23
CDY67404	Canola	plastid	56.31	50.11
CDY46426	Canola	plastid	51.52	49.76
CDY03036	Canola	plastid	55.3	49.55
CDY47489	Canola	plastid	50.76	48.79
CDY26797	Canola	plastid	50.76	48.32
CDY31372	Canola	plastid	50.0	48.29
CDX71350	Canola	plastid	49.75	48.05
CDY40618	Canola	plastid	45.96	46.79
CDX72550	Canola	plastid	45.45	45.92
CDX75515	Canola	plastid	47.73	44.26
CDY24816	Canola	cytosol, plastid	40.91	44.14
CDX69153	Canola	plastid	47.73	43.95
CDY41645	Canola	plastid	46.46	43.6
CDY24815	Canola	plastid	46.46	43.6
CDY47249	Canola	cytosol	51.52	43.31
CDX72549	Canola	plastid	47.47	43.22
CDY40619	Canola	plastid	47.22	42.99
CDY49042	Canola	cytosol	52.27	42.86
CDY04026	Canola	cytosol	51.26	42.83
CDY37534	Canola	nucleus	52.02	42.21
CDY59664	Canola	cytosol	51.01	42.17
CDY28689	Canola	nucleus	51.52	41.89
CDX78606	Canola	nucleus	52.78	41.47
CDX70589	Canola	nucleus	52.78	41.47
CDX87609	Canola	cytosol	46.72	41.2
CDX88265	Canola	cytosol	46.21	41.03
CDX85943	Canola	plastid	44.95	40.55
CDX68102	Canola	plastid	44.7	39.95
CDY00122	Canola	cytosol	51.52	27.76
CDY65043	Canola	cytosol	52.78	13.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:A0A078HQB7	UniProt:A0A078HQB7
EnsemblPlants:CDY39519	ProteinID:CDY39519	ProteinID:CDY39519.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00068041001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDC9F5	SEG:seg	:

Description

BnaC04g15180DBnaC04g15180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQB7]

Coordinates

chrLK032450:+:44593..46333

Molecular Weight (calculated)

44083.8 Da

IEP (calculated)

9.196

GRAVY (calculated)

-0.350

Length

396 amino acids

Sequence
(BLAST)

001: MSSEANDSQS MGSKCSSSSI RTNPRTEGEI LQSPNLKSFS LDELKSATRN FRQDSVLGEG GFGCVFKGWI DEQSLTASKP GTGMVIAVKR LNQDGWQGHQ
101: EWLAEVNYLG QFSHPNLVKL IGYCLEDEHR LLVYEFMPRG SLENHLFRRG SYFQPLSWTL RLKVALGAAQ GLAFLHNAET QVIYRDFKTS NILIDADYNA
201: KLSDFGLAKD GPTGDKSHVS TRIMGTYGYA APEYLVTGHL TTKSDVYSYG VVLLEILSGL RVVDKNRPPG EQKLVDWAKP LLANKRKLFK VIDNRLHDQY
301: SMEEVCKVAT LALRCLTTEI KMRPNMNEVV AHLQHIQALH EAGGGKNIDK VEKRMRRRSD SVVLLSQKPN EGFARQTAVG GIAAAYPRPS ASLLFA

Best Arabidopsis Sequence Match ( AT2G28930.2 )
(BLAST)

001: MGICLSAQIK AVSPGASPKY MSSEANDSLG SKSSSVSIRT NPRTEGEILQ SPNLKSFTFA ELKAATRNFR PDSVLGEGGF GSVFKGWIDE QTLTASKPGT
101: GVVIAVKKLN QDGWQGHQEW LAEVNYLGQF SHPNLVKLIG YCLEDEHRLL VYEFMPRGSL ENHLFRRGSY FQPLSWTLRL KVALGAAKGL AFLHNAETSV
201: IYRDFKTSNI LLDSEYNAKL SDFGLAKDGP TGDKSHVSTR IMGTYGYAAP EYLATGHLTT KSDVYSYGVV LLEVLSGRRA VDKNRPPGEQ KLVEWARPLL
301: ANKRKLFRVI DNRLQDQYSM EEACKVATLA LRCLTFEIKL RPNMNEVVSH LEHIQTLNEA GGRNIDMVQR RMRRRSDSVA INQKPNAGFA RQTAVGVIAT
401: AYPRPSDSPL FV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.