Factsheet for Bra000478.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83305	Canola	plastid	82.5	98.02
Bra035659.1-P	Field mustard	cytosol, plastid	66.67	76.56
Bra040929.1-P	Field mustard	plastid	65.62	76.27
AT2G28930.1	Thale cress	plasma membrane	64.79	73.52
Bra031585.1-P	Field mustard	plastid	61.04	72.17
Bra015592.1-P	Field mustard	plastid	44.58	67.94
PGSC0003DMT400011261	Potato	plastid	54.58	65.34
Solyc06g005500.2.1	Tomato	nucleus	54.38	64.13
KRH23073	Soybean	cytosol, plastid	55.42	63.48
Bra028877.1-P	Field mustard	cytosol	45.42	62.46
VIT_06s0004g04810.t01	Wine grape	plastid	56.25	61.09
KRH10259	Soybean	plastid	54.17	60.32
Bra009599.1-P	Field mustard	plastid	48.75	60.15
Bra017061.1-P	Field mustard	cytosol	42.5	57.63
Bra005716.1-P	Field mustard	plastid	46.67	57.29
Bra005027.1-P	Field mustard	cytosol	45.42	57.07
KRH29797	Soybean	plastid	48.96	57.04
Bra000141.1-P	Field mustard	plastid	45.42	55.47
Bra019654.1-P	Field mustard	cytosol, plastid	44.17	50.48
KRH24792	Soybean	cytosol, plastid	48.33	50.11
Bra016265.1-P	Field mustard	plastid	41.04	50.0
Bra026834.1-P	Field mustard	plastid	44.58	49.77
Bra002031.1-P	Field mustard	plastid	41.25	48.29
Bra016301.1-P	Field mustard	plastid	41.25	48.29
Bra017725.1-P	Field mustard	plastid	38.33	47.3
Bra011627.1-P	Field mustard	plastid	38.75	46.04
Bra037280.1-P	Field mustard	plastid	39.17	45.85
Bra026580.1-P	Field mustard	plastid	44.38	43.65
Bra010530.1-P	Field mustard	plastid	38.12	43.36
Bra017724.1-P	Field mustard	plastid	39.17	43.22
Bra033053.1-P	Field mustard	cytosol	41.88	42.68
Bra039129.1-P	Field mustard	nucleus	42.92	42.39
Bra040508.1-P	Field mustard	nucleus	42.29	41.86
Bra006278.1-P	Field mustard	nucleus	42.92	40.87
Bra008255.1-P	Field mustard	plastid	35.83	40.47
Bra003724.1-P	Field mustard	plastid	36.04	38.7
Bra015757.1-P	Field mustard	cytosol, plastid	31.04	36.7
Bra039049.1-P	Field mustard	cytosol	41.25	25.35
Bra008726.1-P	Field mustard	cytosol	44.79	13.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra000478	EnsemblPlants:Bra000478.1
EnsemblPlants:Bra000478.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4C8F0	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253FFA5	SEG:seg	:	:	:

Description

AT2G28930 (E=7e-169) APK1B | APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA03:-:11293610..11298230

Molecular Weight (calculated)

53675.9 Da

IEP (calculated)

9.299

GRAVY (calculated)

-0.470

Length

480 amino acids

Sequence
(BLAST)

001: MVRKGRLTAH YREMFGEPGS RLDPSSSSAP GSSGQETVPE TQWGIDNCLA SDVTDTIKGY FSMAHPNWKM TPHYVRKTWF KIYAVKAESP SNTGASPKYM
101: SSEANDTQSM GSKCSSVSVR TSPRTEGEIL QSPNLKCFSF AELKAATRNF RLYSVLGEGG FGCVFKGWID EESLTASKPG TGMVIAVKRL NIEGWQGHQE
201: WLAEVNYLGR LSHPNLVKLI GYCLEDEHHL LVYEFMPCGS LENHLFRRGS YFEPLSWNIR LKIALGCAKG LAFLHSAETQ VIYRDFKTSN ILLDSNYNAK
301: LSDFGLAKDG PTGDNSHVST RVIGTYGYVD PGYLLNGHLT TKSDVYSYGV VLLEMLSGRK VVDNNRPPRE QKLVDWAKPL LANKKKVSRV IDNRIRDQIS
401: VKEAHKVATQ VFRCLDVDKN QRPNMNEIVF HLENIQASRE EGGNKTEKRM RRRRDSCAHQ TGVGGIATAY PRPSASPLFV

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.