Factsheet for PGSC0003DMT400048049

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g032150.2.1	Tomato	plastid	97.1	96.17
PGSC0003DMT400045075	Potato	plastid	80.19	80.0
KRH07892	Soybean	cytosol	48.31	76.63
KRH39445	Soybean	plastid	64.73	67.51
GSMUA_Achr4P04920_001	Banana	plastid	62.08	66.58
KRH28911	Soybean	plastid	58.45	66.12
VIT_04s0044g00050.t01	Wine grape	plastid	48.55	66.12
GSMUA_Achr3P14810_001	Banana	plastid	62.56	62.41
TraesCS6A01G052100.2	Wheat	plastid	64.49	61.38
TraesCS6B01G069800.1	Wheat	plastid	64.49	61.24
HORVU6Hr1G010050.1	Barley	plastid	64.25	61.01
GSMUA_Achr3P26960_001	Banana	plastid	56.04	60.89
TraesCSU01G111800.1	Wheat	plastid	64.01	60.78
Os02t0118200-01	Rice	plasma membrane	62.56	60.66
PGSC0003DMT400038068	Potato	plastid	61.11	60.53
Bra011627.1-P	Field mustard	plastid	58.94	60.4
Zm00001d054014_P002	Maize	cytosol, plastid	62.32	60.0
EER90433	Sorghum	plastid	60.39	59.67
TraesCS2D01G038200.1	Wheat	cytosol	55.8	59.38
GSMUA_Achr1P18020_001	Banana	plastid	61.35	59.21
EES04370	Sorghum	plastid	62.32	59.17
KRH28912	Soybean	plastid	57.73	59.01
EER95575	Sorghum	cytosol	55.56	58.97
Os06t0727400-01	Rice	plasma membrane	58.94	58.94
CDY24816	Canola	cytosol, plastid	52.17	58.86
CDY40618	Canola	plastid	55.07	58.61
Bra017725.1-P	Field mustard	plastid	55.07	58.61
Zm00001d014850_P002	Maize	plastid	58.45	58.6
CDX72550	Canola	plastid	55.31	58.42
Zm00001d015012_P001	Maize	plastid	63.53	58.06
AT4G35600.2	Thale cress	plastid	58.7	57.86
CDX75515	Canola	plastid	59.66	57.85
TraesCS7B01G473700.1	Wheat	plastid	57.25	57.52
TraesCSU01G105900.1	Wheat	plastid	57.73	57.45
TraesCS7A01G550300.1	Wheat	plastid	57.73	57.45
CDX69153	Canola	plastid	59.42	57.21
CDY40619	Canola	plastid	59.9	57.01
Bra017724.1-P	Field mustard	plastid	59.9	57.01
CDX72549	Canola	plastid	59.42	56.55
Bra010530.1-P	Field mustard	plastid	57.25	56.16
CDY24815	Canola	plastid	57.25	56.16
KRH07902	Soybean	plastid	52.17	55.81
TraesCS2A01G039600.1	Wheat	cytosol	56.76	55.69
Zm00001d048342_P001	Maize	plastid	54.59	55.39
KRH07906	Soybean	plastid	55.56	55.16
TraesCS6D01G235300.1	Wheat	cytosol	58.21	55.02
CDY41645	Canola	plastid	56.04	54.98
TraesCS2B01G422500.1	Wheat	cytosol	60.14	54.97
Zm00001d026126_P001	Maize	plastid	60.39	54.82
KXG26902	Sorghum	cytosol	60.63	54.45
TraesCS2A01G404600.1	Wheat	cytosol	59.9	54.27
TraesCS2D01G401500.2	Wheat	cytosol	59.66	54.05
PGSC0003DMT400025864	Potato	plastid	54.35	53.96
TraesCS6A01G253700.1	Wheat	cytosol	58.7	53.64
PGSC0003DMT400011261	Potato	plastid	51.93	53.62
Os02t0670100-00	Rice	cytosol, plasma membrane	58.94	52.81
TraesCS6A01G051600.1	Wheat	cytosol	47.83	52.8
HORVU6Hr1G064690.4	Barley	cytosol	57.97	52.63
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	47.58	52.53
GSMUA_Achr2P11330_001	Banana	cytosol	43.96	52.3
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	52.66	52.03
HORVU6Hr1G009900.9	Barley	mitochondrion	42.03	51.94
TraesCS6B01G271700.1	Wheat	cytosol	57.49	51.74
Os04t0563900-00	Rice	plasma membrane	59.18	51.58
PGSC0003DMT400095910	Potato	cytosol	40.82	51.37
PGSC0003DMT400028591	Potato	plastid	50.97	51.09
PGSC0003DMT400071329	Potato	plastid	48.55	51.02
TraesCS6B01G069300.1	Wheat	cytosol	46.14	50.8
Zm00001d027509_P002	Maize	cytosol	45.89	50.67
TraesCSU01G110700.2	Wheat	cytosol	45.89	50.53
EES05745	Sorghum	cytosol	57.73	50.53
PGSC0003DMT400002280	Potato	plastid	50.97	50.36
Zm00001d051424_P001	Maize	plastid	54.11	50.22
PGSC0003DMT400023009	Potato	cytosol, plastid	49.76	49.52
PGSC0003DMT400065801	Potato	plastid	49.76	49.05
TraesCS2B01G052500.1	Wheat	cytosol	54.11	48.48
PGSC0003DMT400082362	Potato	plastid	45.89	47.98
HORVU7Hr1G121690.5	Barley	plastid	57.0	47.48
KRH07896	Soybean	plastid	54.59	46.69
PGSC0003DMT400003582	Potato	cytosol	39.86	46.48
PGSC0003DMT400045429	Potato	cytosol	48.31	41.93
PGSC0003DMT400002229	Potato	cytosol	47.58	40.87
PGSC0003DMT400079361	Potato	cytosol	44.44	38.41
PGSC0003DMT400049853	Potato	plasma membrane	43.0	36.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102605154	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BLW0	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400018672
PGSC:PGSC0003DMG400018672	EnsemblPlants:PGSC0003DMT400048049	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295A356	RefSeq:XP_006343333.1	SEG:seg	:	:

Description

Serine/threonine-protein kinase cx32 [Source:PGSC_GENE;Acc:PGSC0003DMG400018672]

Coordinates

chr3:+:3152700..3157885

Molecular Weight (calculated)

45366.9 Da

IEP (calculated)

9.657

GRAVY (calculated)

-0.471

Length

414 amino acids

Sequence
(BLAST)

001: MGNCFGAKLS NSKSSSTYPS FSARPSTPDT SKSYSNGVGY SATSGSIGCS NFSAAASEDT CLNGEILPIP NLKIYSFSDL KLSTKNFKPD SVLGIGGFGT
101: VYKGWVDEKT LTPTKPGTGM IVAIKKLNSE STQGFEEWQS EVNFLGRLSH PNLVKLLGYC HEDKELLLVY EFMPKGSLEN HLFRRSAAIE PLSWDLRLKI
201: AIGAARGLAF LHTSEKKVIY RDFKASNILL DGNYNAKISD FGLAKLGPSG SDSHVTTRVM GTYGYAAPEY VETGHLYVKS DVYGFGVVVL ELLTGLRALD
301: TKRPNGQEKL VDWVKPMLSN KRKLKSIMDA RMEGQYSSKA ATLAAQITLE CLEGDPKNRP SMKEVTNVLE QIEAIKENPK ESKSKSEHSS SHRHRQSPRS
401: RQSPRHTNGQ GSGK

Best Arabidopsis Sequence Match ( AT4G35600.2 )
(BLAST)

001: MGACISFFSS SSPSKTGLHS HAATTNNHSN GTEFSSTTGA TTNSSVGQQS QFSDISTGII SDSGKLLESP NLKVYNFLDL KTATKNFKPD SMLGQGGFGK
101: VYRGWVDATT LAPSRVGSGM IVAIKRLNSE SVQGFAEWRS EVNFLGMLSH RNLVKLLGYC REDKELLLVY EFMPKGSLES HLFRRNDPFP WDLRIKIVIG
201: AARGLAFLHS LQREVIYRDF KASNILLDSN YDAKLSDFGL AKLGPADEKS HVTTRIMGTY GYAAPEYMAT GHLYVKSDVF AFGVVLLEIM TGLTAHNTKR
301: PRGQESLVDW LRPELSNKHR VKQIMDKGIK GQYTTKVATE MARITLSCIE PDPKNRPHMK EVVEVLEHIQ GLNVVPNRSS TKQAVANSSR SSPHHYRYKA
401: GALGAERKRA TPGRFGSVEK

Arabidopsis Description

CONNEXIN 32Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JN38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.