Factsheet for TraesCSU01G105900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G550300.1	Wheat	plastid	99.04	99.04
TraesCS7B01G473700.1	Wheat	plastid	97.84	98.79
HORVU7Hr1G121690.5	Barley	plastid	96.15	80.48
Os06t0727400-01	Rice	plasma membrane	79.33	79.71
EER90433	Sorghum	plastid	79.57	79.0
Zm00001d014850_P002	Maize	plastid	77.16	77.72
GSMUA_Achr4P04920_001	Banana	plastid	64.18	69.17
KRH07892	Soybean	cytosol	42.79	68.2
GSMUA_Achr1P18020_001	Banana	plastid	67.55	65.5
GSMUA_Achr3P14810_001	Banana	plastid	64.66	64.82
GSMUA_Achr3P26960_001	Banana	plastid	55.77	60.89
TraesCSU01G111800.1	Wheat	plastid	63.46	60.55
KRH39445	Soybean	plastid	57.45	60.2
KRH28911	Soybean	plastid	52.88	60.11
Solyc01g112220.2.1	Tomato	plastid	58.65	59.51
PGSC0003DMT400045075	Potato	plastid	58.65	58.8
Bra002031.1-P	Field mustard	plastid	57.69	58.54
CDY31372	Canola	plastid	57.45	58.29
PGSC0003DMT400038068	Potato	plastid	58.41	58.13
CDX71350	Canola	plastid	57.21	58.05
KRH74099	Soybean	plastid	57.21	57.77
KRH14015	Soybean	plastid	57.21	57.77
PGSC0003DMT400048049	Potato	plastid	57.45	57.73
AT2G17220.1	Thale cress	plastid	57.21	57.49
CDY47489	Canola	plastid	56.73	57.28
Solyc03g032150.2.1	Tomato	plastid	57.45	57.18
VIT_03s0038g03800.t01	Wine grape	plastid	58.17	56.81
CDY26797	Canola	plastid	56.73	56.73
VIT_04s0044g00050.t01	Wine grape	plastid	40.62	55.59
Bra037280.1-P	Field mustard	plastid	54.33	55.12
KRH51603	Soybean	mitochondrion, plastid	48.56	54.74
KRH60921	Soybean	cytosol	48.56	54.59
KRH28912	Soybean	plastid	52.16	53.58
Bra011627.1-P	Field mustard	plastid	51.68	53.22
VIT_18s0122g01270.t01	Wine grape	plastid	52.16	51.91
CDY40618	Canola	plastid	48.32	51.67
Bra017725.1-P	Field mustard	plastid	48.32	51.67
CDX72550	Canola	plastid	48.56	51.53
CDX69153	Canola	plastid	53.12	51.4
KRH07906	Soybean	plastid	51.2	51.08
CDX75515	Canola	plastid	52.4	51.05
AT4G35600.2	Thale cress	plastid	51.44	50.95
CDY24816	Canola	cytosol, plastid	44.71	50.68
PGSC0003DMT400025864	Potato	plastid	50.48	50.36
CDY24815	Canola	plastid	50.96	50.24
Bra010530.1-P	Field mustard	plastid	50.96	50.24
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	45.19	50.13
Solyc04g082500.2.1	Tomato	nucleus	49.52	49.88
CDY41645	Canola	plastid	50.48	49.76
Bra017724.1-P	Field mustard	plastid	51.92	49.66
CDY40619	Canola	plastid	51.92	49.66
CDX72549	Canola	plastid	51.68	49.43
VIT_18s0122g01260.t01	Wine grape	plastid	52.64	48.88
TraesCSU01G110700.2	Wheat	cytosol	43.99	48.67
KRH07902	Soybean	plastid	44.71	48.06
CDX87609	Canola	cytosol	50.0	46.33
CDX88265	Canola	cytosol	49.28	45.96
Bra008255.1-P	Field mustard	plastid	46.88	45.88
CDX85943	Canola	plastid	47.12	44.65
Bra003724.1-P	Field mustard	plastid	47.84	44.52
CDX68102	Canola	plastid	47.12	44.24
Bra015757.1-P	Field mustard	cytosol, plastid	42.55	43.6
AT1G76360.1	Thale cress	plastid	50.24	43.18
KRH07896	Soybean	plastid	48.32	41.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF13	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCSU01G105900	EnsemblPlants:TraesCSU01G105900.1	TIGR:cd14066	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:-:92744079..92747391

Molecular Weight (calculated)

45564.6 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.360

Length

416 amino acids

Sequence
(BLAST)

001: MGNCASAMDG LIPWGWGAKP AAANPAGMSA SKRTTSSSTT ATTGKLSTVS TSTFMASTVS GGSTDDCYEE GGHILESPNL RIFTFAELRG ACKNFKPETV
101: LGEGGFGKVY KGWIDVNPAK GSTAMVVAVK KLNPESVQGM EQWQSEVNFL GRISHPNLVK LLGYCMEDNE LLLVYEFMAK GSLENHLFRR GAIYEPLPWS
201: LRLKILIGAA RGLAFLHSSE RQIIYRDFKA SNILLDSHFN PKLSDFGLAK HGPDDGESHV TTRVMGTYGY AAPEYVSTGH LYVKSDVYGF GVVLLEMLCG
301: LRALDPSRPS EKLNLVNWAK PLLSDRRRLT QLMDSRLEGQ YHARGAFRAA QLTLKCLAGE PKSRPSMKEV VEVLEQIEAM KSKSKSREAR RDSPSMPRGR
401: GNSPRSDGAR TNSRGR

Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)

001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG

Arabidopsis Description

At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.