Factsheet for VIT_03s0038g03800.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g112220.2.1	Tomato	plastid	73.0	75.85
KRH74099	Soybean	plastid	72.77	75.24
KRH14015	Soybean	plastid	72.54	75.0
PGSC0003DMT400038068	Potato	plastid	73.24	74.64
AT2G17220.1	Thale cress	plastid	67.61	69.57
Bra002031.1-P	Field mustard	plastid	64.79	67.32
CDY31372	Canola	plastid	64.79	67.32
CDX71350	Canola	plastid	64.32	66.83
CDY47489	Canola	plastid	63.85	66.02
CDY26797	Canola	plastid	63.85	65.38
GSMUA_Achr4P04920_001	Banana	plastid	58.22	64.25
Bra037280.1-P	Field mustard	plastid	61.27	63.66
GSMUA_Achr3P14810_001	Banana	plastid	61.03	62.65
VIT_04s0044g00050.t01	Wine grape	plastid	44.13	61.84
GSMUA_Achr1P18020_001	Banana	plastid	61.97	61.54
EES04370	Sorghum	plastid	62.91	61.47
Os02t0118200-01	Rice	plasma membrane	61.5	61.36
Zm00001d054014_P002	Maize	cytosol, plastid	61.74	61.16
TraesCS6B01G069800.1	Wheat	plastid	62.44	61.01
TraesCS6A01G052100.2	Wheat	plastid	62.21	60.92
TraesCSU01G111800.1	Wheat	plastid	62.21	60.78
HORVU6Hr1G010050.1	Barley	plastid	62.21	60.78
Os06t0727400-01	Rice	plasma membrane	58.92	60.63
TraesCS7B01G473700.1	Wheat	plastid	56.81	58.74
TraesCS2D01G038200.1	Wheat	cytosol	53.52	58.61
GSMUA_Achr3P26960_001	Banana	plastid	52.35	58.53
Zm00001d015012_P001	Maize	plastid	61.97	58.28
EER95575	Sorghum	cytosol	53.29	58.21
TraesCSU01G105900.1	Wheat	plastid	56.81	58.17
TraesCS7A01G550300.1	Wheat	plastid	56.57	57.93
EER90433	Sorghum	plastid	56.81	57.76
Zm00001d014850_P002	Maize	plastid	55.87	57.63
TraesCS6D01G235300.1	Wheat	cytosol	57.75	56.16
Zm00001d048342_P001	Maize	plastid	53.29	55.64
Zm00001d026126_P001	Maize	plastid	59.15	55.26
KXG26902	Sorghum	cytosol	59.39	54.88
HORVU6Hr1G064690.4	Barley	cytosol	58.69	54.82
VIT_18s0122g01270.t01	Wine grape	plastid	53.76	54.78
TraesCS2B01G422500.1	Wheat	cytosol	58.22	54.75
TraesCS6A01G253700.1	Wheat	cytosol	57.98	54.53
TraesCS2A01G039600.1	Wheat	cytosol	53.99	54.5
TraesCS2A01G404600.1	Wheat	cytosol	58.45	54.49
TraesCS2D01G401500.2	Wheat	cytosol	58.45	54.49
Os02t0670100-00	Rice	cytosol, plasma membrane	57.98	53.46
VIT_18s0122g01260.t01	Wine grape	plastid	55.87	53.12
TraesCS6B01G271700.1	Wheat	cytosol	57.28	53.04
GSMUA_Achr2P11330_001	Banana	cytosol	43.19	52.87
Zm00001d051424_P001	Maize	plastid	54.93	52.47
EES05745	Sorghum	cytosol	58.22	52.43
VIT_08s0007g00420.t01	Wine grape	plastid	49.77	52.35
HORVU6Hr1G009900.9	Barley	mitochondrion	41.08	52.24
Os04t0563900-00	Rice	plasma membrane	58.22	52.21
TraesCS6A01G051600.1	Wheat	cytosol	45.77	52.0
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	50.94	51.79
VIT_13s0019g01080.t01	Wine grape	plastid	48.12	50.74
VIT_01s0026g01880.t01	Wine grape	cytosol	50.0	50.71
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	44.37	50.4
Zm00001d027509_P002	Maize	cytosol	44.37	50.4
TraesCS6B01G069300.1	Wheat	cytosol	44.37	50.27
TraesCSU01G110700.2	Wheat	cytosol	43.66	49.47
VIT_06s0004g04810.t01	Wine grape	plastid	50.7	48.87
HORVU7Hr1G121690.5	Barley	plastid	56.57	48.49
TraesCS2B01G052500.1	Wheat	cytosol	52.35	48.27
VIT_06s0009g01810.t01	Wine grape	plastid	43.43	45.91
VIT_11s0016g05720.t01	Wine grape	cytosol	44.37	44.06
VIT_14s0108g00380.t01	Wine grape	cytosol	47.18	42.32
VIT_01s0026g01620.t01	Wine grape	cytosol	46.01	40.75

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100255530	wikigene:100255530	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CCB60536
ProteinID:CCB60536.1	UniProt:F6I0S0	EMBL:FN596508	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100255530	wikigene:LOC100255530	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC58326	UniParc:UPI000210A7E1	ArrayExpress:VIT_03s0038g03800
EnsemblPlantsGene:VIT_03s0038g03800	EnsemblPlants:VIT_03s0038g03800.t01	RefSeq:XP_002279800	RefSeq:XP_002279800.2	RefSeq:XP_003631561	RefSeq:XP_003631561.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:2760387..2764671

Molecular Weight (calculated)

47166.1 Da

IEP (calculated)

10.135

GRAVY (calculated)

-0.455

Length

426 amino acids

Sequence
(BLAST)

001: MGICWSSSKD TITPITTGNL STAGVSQTTT NTTSSRGSNF SRNSQFSAAS GGSDEAFPNG QILPHPNLRI FTFSELKAAT KNFRPDTVLG EGGFGKVFKG
101: WLDEKVSKSG SGTVIAVKKL NSESMQGFEE WQSEVNFLGR LSHPNLVKLL GYCWEDKELL LVYEFMQKGS LENHLFGRGA TVQPLPWDIR LKISIGAARG
201: LTFLHTSEKQ VIYRDFKASN ILLDGSYTAK ISDFGLAKLG PTASQSHVTT RVMGTYGYAA PEYVATGHLY VKSDVYGFGV VLVEMLTGLR ALDTTRPSGQ
301: HNLVDWIKPH LSDRRKLKTI MDARLEGRYP SKAANQIAQL SLRCIGSEHK SRPSMKEVLE TLERIEAYNE RPREPRVRPA RPAVQRHGQP PLHHRSPLHP
401: RQNGSQANQH SPWASFSAQS LFAHPQ

Best Arabidopsis Sequence Match ( AT2G17220.1 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK
101: VFKGWLEDKT PGKQSNGTVI AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL FRKGSAVQPL SWEIRLKIAI
201: GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT
301: RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ
401: LSSFRPRQNV SRAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.