CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d054014_P002	Maize	cytosol, plastid	90.83	92.09
Zm00001d015012_P001	Maize	plastid	94.04	90.51
Os02t0118200-01	Rice	plasma membrane	85.78	87.59
HORVU6Hr1G010050.1	Barley	plastid	86.47	86.47
TraesCS6B01G069800.1	Wheat	plastid	86.47	86.47
TraesCSU01G111800.1	Wheat	plastid	85.78	85.78
TraesCS6A01G052100.2	Wheat	plastid	85.55	85.75
KRH07892	Soybean	cytosol	41.05	68.58
Solyc01g112220.2.1	Tomato	plastid	59.86	63.66
EER90433	Sorghum	plastid	61.01	63.48
VIT_03s0038g03800.t01	Wine grape	plastid	61.47	62.91
VIT_04s0044g00050.t01	Wine grape	plastid	43.81	62.83
PGSC0003DMT400038068	Potato	plastid	60.09	62.68
PGSC0003DMT400045075	Potato	plastid	59.63	62.65
PGSC0003DMT400048049	Potato	plastid	59.17	62.32
KRH28911	Soybean	plastid	52.06	62.02
Solyc03g032150.2.1	Tomato	plastid	59.4	61.96
HORVU6Hr1G009900.9	Barley	mitochondrion	47.48	61.79
TraesCS6A01G051600.1	Wheat	cytosol	52.98	61.6
EER95575	Sorghum	cytosol	55.05	61.54
KRH74099	Soybean	plastid	57.8	61.16
KRH39445	Soybean	plastid	55.5	60.96
KRH14015	Soybean	plastid	57.57	60.92
AT2G17220.1	Thale cress	plastid	57.8	60.87
KXG26902	Sorghum	cytosol	63.99	60.52
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	51.83	60.27
CDY47489	Canola	plastid	56.42	59.71
CDY31372	Canola	plastid	55.73	59.27
Bra002031.1-P	Field mustard	plastid	55.73	59.27
CDY26797	Canola	plastid	56.42	59.13
CDX71350	Canola	plastid	55.5	59.02
TraesCS6B01G069300.1	Wheat	cytosol	50.69	58.78
TraesCSU01G110700.2	Wheat	cytosol	50.46	58.51
Bra037280.1-P	Field mustard	plastid	54.36	57.8
EES18885	Sorghum	plastid	52.52	56.54
KRH60921	Soybean	cytosol	47.48	55.95
KRH51603	Soybean	mitochondrion, plastid	47.25	55.83
KRH28912	Soybean	plastid	51.38	55.31
EES05745	Sorghum	cytosol	59.86	55.18
Bra017725.1-P	Field mustard	plastid	48.85	54.76
CDY40618	Canola	plastid	48.85	54.76
Bra011627.1-P	Field mustard	plastid	50.69	54.7
EER92482	Sorghum	plastid	47.25	54.21
VIT_18s0122g01270.t01	Wine grape	plastid	51.83	54.07
Solyc04g082500.2.1	Tomato	nucleus	51.15	54.0
PGSC0003DMT400025864	Potato	plastid	51.61	53.96
CDX72550	Canola	plastid	48.17	53.57
KRH07906	Soybean	plastid	51.15	53.48
AT4G35600.2	Thale cress	plastid	51.38	53.33
CDX69153	Canola	plastid	52.29	53.02
CDX75515	Canola	plastid	51.83	52.93
CDY24816	Canola	cytosol, plastid	44.5	52.86
CDX72549	Canola	plastid	52.52	52.64
CDY40619	Canola	plastid	52.29	52.41
Bra017724.1-P	Field mustard	plastid	52.29	52.41
CDY24815	Canola	plastid	50.23	51.9
Bra010530.1-P	Field mustard	plastid	50.23	51.9
VIT_18s0122g01260.t01	Wine grape	plastid	53.21	51.79
CDY41645	Canola	plastid	50.0	51.66
EER93184	Sorghum	plastid	49.08	51.2
KRH07902	Soybean	plastid	45.18	50.9
Bra008255.1-P	Field mustard	plastid	46.1	47.29
CDX87609	Canola	cytosol	48.62	47.22
CDX88265	Canola	cytosol	47.94	46.86
KXG19409	Sorghum	mitochondrion	44.04	46.83
EER92783	Sorghum	plastid	47.02	46.7
EER94269	Sorghum	plastid	46.1	46.42
CDX85943	Canola	plastid	46.33	46.01
Bra003724.1-P	Field mustard	plastid	47.02	45.86
EER99941	Sorghum	plastid	42.89	45.72
CDX68102	Canola	plastid	46.33	45.6
AT1G76360.1	Thale cress	plastid	49.77	44.83
KRH07896	Soybean	plastid	49.54	44.63
Bra015757.1-P	Field mustard	cytosol, plastid	41.51	44.58
EER96629	Sorghum	cytosol	46.79	40.72
EES03187	Sorghum	cytosol	45.41	40.24
OQU78536	Sorghum	plasma membrane	42.89	30.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8068233	UniProt:C5XSC9	EnsemblPlants:EES04370
ProteinID:EES04370	ProteinID:EES04370.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3004G014000	SUPFAM:SSF56112	unigene:Sbi.12677
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8521C	RefSeq:XP_002451394.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:1144517..1149986

Molecular Weight (calculated)

47458.4 Da

IEP (calculated)

10.160

GRAVY (calculated)

-0.506

Length

436 amino acids

Sequence
(BLAST)

001: MGNICGGKDR VAEDFRPSSP GTTMTSKTSG SLTTSQSTTG KLSSVSSGFM ASAGSRSTSG GFVDEGAKYP DGQILEAPNL RTFTFMELKT ATKNFRPDSV
101: LGEGGFGRVY KGWVDEKTMA PTRNGTGMVV AVKKLNSESM QGYEEWQSEI NFLGRLSHPN LVKLLGYCWE DKELLLVYEF MAKGSLENHL FRRGCAPLSW
201: ELRLKISIGA ARGLAFLHAS EKQVIYRDFK ASNILLDANY NAKLSDFGLA KLGPTGSNSH ITTRVMGTYG YAAPEYVATG HLYVKSDVYG FGVVMLEMLS
301: GQRALDPNRP SGQLSLADWA KPYLADRRKL ARLMDPRFEG QYNSKQAFQA AQLTLNCLAG EPRSRPSMKE VVETLEHIES MKSRARDARG GGSGSTRDRH
401: HGRTGAAHQR SPRAGGEPRG RGASRASNGH AGRAAR

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.