CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034662_P001	Maize	plastid	92.82	92.6
Zm00001d012958_P001	Maize	plastid	91.39	91.39
Os03t0821900-01	Rice	plastid	83.25	82.08
TraesCS5D01G493800.1	Wheat	plastid	82.54	81.18
TraesCS5B01G493500.1	Wheat	plastid	82.54	81.18
TraesCS5A01G480600.1	Wheat	plastid	83.01	80.32
HORVU5Hr1G113300.2	Barley	mitochondrion	82.3	77.13
GSMUA_Achr8P34290_001	Banana	plastid	66.99	70.89
EES18885	Sorghum	plastid	67.7	69.88
VIT_08s0007g00420.t01	Wine grape	plastid	64.35	66.42
KRG99951	Soybean	plastid	64.35	65.61
VIT_13s0019g01080.t01	Wine grape	plastid	63.4	65.59
KRH73031	Soybean	plastid	61.24	65.31
EER92482	Sorghum	plastid	58.61	64.47
KRH49102	Soybean	plastid	63.16	64.39
KRH15105	Soybean	cytosol, nucleus	58.37	64.04
Solyc04g011520.2.1	Tomato	nucleus	60.29	63.96
PGSC0003DMT400071329	Potato	plastid	59.81	63.45
Solyc10g084770.1.1	Tomato	cytosol, plastid	62.68	63.44
PGSC0003DMT400028591	Potato	plastid	61.96	62.71
KRG97912	Soybean	cytosol	57.89	62.69
PGSC0003DMT400023009	Potato	cytosol, plastid	61.96	62.26
KRH65832	Soybean	plastid	61.24	61.84
Solyc09g010850.2.1	Tomato	cytosol, plastid	61.48	61.78
KRH75643	Soybean	plastid	61.0	61.74
Solyc05g053930.2.1	Tomato	plastid	59.09	60.39
KRH15106	Soybean	cytosol	2.15	52.94
EER92783	Sorghum	plastid	54.07	51.48
EER95575	Sorghum	cytosol	47.85	51.28
KXG19409	Sorghum	mitochondrion	49.76	50.73
EER94269	Sorghum	plastid	51.91	50.12
EER90433	Sorghum	plastid	49.28	49.16
EER99941	Sorghum	plastid	48.09	49.14
EES04370	Sorghum	plastid	51.2	49.08
KXG26902	Sorghum	cytosol	53.35	48.37
EER96629	Sorghum	cytosol	55.26	46.11
EES03187	Sorghum	cytosol	53.59	45.53
EES05745	Sorghum	cytosol	50.72	44.82
OQU78536	Sorghum	plasma membrane	50.0	34.21

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EntrezGene:8057041	UniProt:C5WV03
EnsemblPlants:EER93184	ProteinID:EER93184	ProteinID:EER93184.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF490	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G033400	SUPFAM:SSF56112
unigene:Sbi.19514	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A82977	RefSeq:XP_002466186.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:2528909..2533375

Molecular Weight (calculated)

45901.8 Da

IEP (calculated)

9.553

GRAVY (calculated)

-0.424

Length

418 amino acids

Sequence
(BLAST)

001: MGNCCCWGAR IKDGSPHPGT SGMFSKSGGK DGSRLSGCSS RASSASMPTS AKTECEILQS ANVKVFTFNN LKAATRNFRP DSVLGEGGFG SVYKGWIDEN
101: TLSPCRPGTG IAVAVKKLNP EGLQGHREWL AEVNYLGQFC HPNLVKLIGY CVEDEHRLLV YEFMPRGSLE NHLFRRGSYF QPLSWNLRMK VALGAAKGLA
201: YLHSAEAKVI YRDFKTSNIL LDTDYSAKLS DFGLAKDGPV GEKSHVSTRV MGTYGYAAPE YLSTGHLTTK SDIYSFGVVL LEMLSGRRAI DKNRPQGEHN
301: LVEWARPYLA HKRKIFRILD TRLEGQYNLN SAQSIAALAL ECLSYEAKMR PTMDDVVTIL QEVQDSSEAE KLQEPKAGTK QAPAAVTASK STRNPRRRSL
401: AGTKETVGPN PKPLAHSR

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.