Factsheet for VIT_04s0044g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39445	Soybean	plastid	64.8	49.62
KRH28911	Soybean	plastid	59.54	49.45
PGSC0003DMT400045075	Potato	plastid	67.11	49.16
KRH07892	Soybean	cytosol	42.11	49.04
Solyc03g032150.2.1	Tomato	plastid	67.11	48.8
GSMUA_Achr4P04920_001	Banana	plastid	61.84	48.7
PGSC0003DMT400048049	Potato	plastid	66.12	48.55
GSMUA_Achr3P26960_001	Banana	plastid	58.55	46.72
EER95575	Sorghum	cytosol	58.22	45.38
GSMUA_Achr3P14810_001	Banana	plastid	61.51	45.06
Zm00001d054014_P002	Maize	cytosol, plastid	62.83	44.42
VIT_03s0038g03800.t01	Wine grape	plastid	61.84	44.13
GSMUA_Achr1P18020_001	Banana	plastid	62.17	44.06
EES04370	Sorghum	plastid	62.83	43.81
TraesCS2D01G038200.1	Wheat	cytosol	55.92	43.7
TraesCS6A01G052100.2	Wheat	plastid	62.5	43.68
KRH28912	Soybean	plastid	57.89	43.46
TraesCS6B01G069800.1	Wheat	plastid	62.17	43.35
HORVU6Hr1G010050.1	Barley	plastid	62.17	43.35
Zm00001d048342_P001	Maize	plastid	57.89	43.14
TraesCSU01G111800.1	Wheat	plastid	61.51	42.89
Os02t0118200-01	Rice	plasma membrane	59.87	42.62
Os06t0727400-01	Rice	plasma membrane	57.89	42.51
EER90433	Sorghum	plastid	58.55	42.48
Zm00001d014850_P002	Maize	plastid	57.57	42.37
Zm00001d015012_P001	Maize	plastid	62.83	42.16
Bra011627.1-P	Field mustard	plastid	55.59	41.83
TraesCS7B01G473700.1	Wheat	plastid	56.25	41.5
KRH07902	Soybean	plastid	52.63	41.34
CDY40618	Canola	plastid	52.63	41.13
Bra017725.1-P	Field mustard	plastid	52.63	41.13
TraesCS2A01G039600.1	Wheat	cytosol	56.91	41.0
TraesCS7A01G550300.1	Wheat	plastid	55.92	40.87
CDX72550	Canola	plastid	52.63	40.82
KRH07906	Soybean	plastid	55.92	40.77
CDX75515	Canola	plastid	57.24	40.75
TraesCS6D01G235300.1	Wheat	cytosol	58.55	40.64
TraesCSU01G105900.1	Wheat	plastid	55.59	40.62
HORVU6Hr1G009900.9	Barley	mitochondrion	44.74	40.6
CDX69153	Canola	plastid	57.24	40.47
VIT_18s0122g01270.t01	Wine grape	plastid	55.59	40.43
Zm00001d026126_P001	Maize	plastid	60.53	40.35
KXG26902	Sorghum	cytosol	61.18	40.35
AT4G35600.2	Thale cress	plastid	55.26	40.0
CDY41645	Canola	plastid	55.26	39.81
CDY24816	Canola	cytosol, plastid	48.03	39.78
CDY24815	Canola	plastid	54.93	39.57
Bra010530.1-P	Field mustard	plastid	54.93	39.57
CDY40619	Canola	plastid	56.25	39.31
Bra017724.1-P	Field mustard	plastid	56.25	39.31
TraesCS6A01G253700.1	Wheat	cytosol	58.55	39.29
Zm00001d027509_P002	Maize	cytosol	48.36	39.2
Os02t0670100-00	Rice	cytosol, plasma membrane	59.54	39.18
CDX72549	Canola	plastid	55.92	39.08
TraesCS2B01G422500.1	Wheat	cytosol	58.22	39.07
VIT_18s0122g01260.t01	Wine grape	plastid	57.57	39.06
VIT_01s0026g01880.t01	Wine grape	cytosol	53.95	39.05
TraesCS6B01G271700.1	Wheat	cytosol	58.88	38.91
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	53.62	38.9
VIT_13s0019g01080.t01	Wine grape	plastid	51.64	38.86
HORVU6Hr1G064690.4	Barley	cytosol	58.22	38.82
GSMUA_Achr2P11330_001	Banana	cytosol	44.41	38.79
VIT_08s0007g00420.t01	Wine grape	plastid	51.64	38.77
TraesCS2A01G404600.1	Wheat	cytosol	57.57	38.29
TraesCS2D01G401500.2	Wheat	cytosol	57.24	38.07
TraesCS6A01G051600.1	Wheat	cytosol	46.71	37.87
EES05745	Sorghum	cytosol	58.88	37.84
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	46.38	37.6
Os04t0563900-00	Rice	plasma membrane	58.55	37.47
TraesCSU01G110700.2	Wheat	cytosol	45.39	36.7
TraesCS6B01G069300.1	Wheat	cytosol	45.39	36.7
TraesCS2B01G052500.1	Wheat	cytosol	55.59	36.58
VIT_06s0009g01810.t01	Wine grape	plastid	47.37	35.73
VIT_06s0004g04810.t01	Wine grape	plastid	51.32	35.29
Zm00001d051424_P001	Maize	plastid	51.64	35.2
KRH07896	Soybean	plastid	54.61	34.3
HORVU7Hr1G121690.5	Barley	plastid	54.93	33.6
VIT_11s0016g05720.t01	Wine grape	cytosol	46.71	33.1
VIT_01s0026g01620.t01	Wine grape	cytosol	51.64	32.64
VIT_14s0108g00380.t01	Wine grape	cytosol	50.0	32.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100241940	wikigene:100241940	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB60468
ProteinID:CCB60468.1	UniProt:F6I0K2	EMBL:FN596506	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100241940	wikigene:LOC100241940	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00021094B0	ArrayExpress:VIT_04s0044g00050	EnsemblPlantsGene:VIT_04s0044g00050	EnsemblPlants:VIT_04s0044g00050.t01	RefSeq:XP_002280326
RefSeq:XP_002280326.2	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:20730246..20733256

Molecular Weight (calculated)

32792.7 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.283

Length

304 amino acids

Sequence
(BLAST)

001: MGNCCGSPST EPTPSFPGTS TQVNEVPSSK FSVSGTSDNT SNDGGLSITS SSAGNGRLSA APASESHDEA FPEGQILPTP NLKIFSFADL KTATRNFKSD
101: NVLGIGGFGT VFKGSVDEKT LAPCKAGTGM VVAIKKLNPE SLQGFQEWQS EVNFLGRLSH PNLVKLLGYC WDDKELLLVY EFMQKGSLEN HLFRRNPSIE
201: PLSWQLRLKI AIGAARGLAF LHTSDKQVIY RDFKASNILL DGEYNAKISD FGLAKLGPSG GESHVTTRVM GTYGYAAPEY IATGDENFFS KSILQHMLGS
301: NFKK

Best Arabidopsis Sequence Match ( AT2G17220.1 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK
101: VFKGWLEDKT PGKQSNGTVI AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL FRKGSAVQPL SWEIRLKIAI
201: GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT
301: RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ
401: LSSFRPRQNV SRAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.