Factsheet for PGSC0003DMT400038068

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g112220.2.1	Tomato	plastid	95.93	97.8
VIT_03s0038g03800.t01	Wine grape	plastid	74.64	73.24
KRH14015	Soybean	plastid	70.81	71.84
KRH74099	Soybean	plastid	70.33	71.36
AT2G17220.1	Thale cress	plastid	67.94	68.6
Bra002031.1-P	Field mustard	plastid	65.31	66.59
CDY31372	Canola	plastid	65.31	66.59
CDX71350	Canola	plastid	64.83	66.1
CDY47489	Canola	plastid	64.35	65.29
CDY26797	Canola	plastid	64.35	64.66
Bra037280.1-P	Field mustard	plastid	61.96	63.17
GSMUA_Achr4P04920_001	Banana	plastid	58.13	62.95
PGSC0003DMT400045075	Potato	plastid	61.48	61.93
GSMUA_Achr3P14810_001	Banana	plastid	61.0	61.45
PGSC0003DMT400048049	Potato	plastid	60.53	61.11
TraesCS6A01G052100.2	Wheat	plastid	62.68	60.23
Os06t0727400-01	Rice	plasma membrane	59.57	60.14
EES04370	Sorghum	plastid	62.68	60.09
TraesCS6B01G069800.1	Wheat	plastid	62.44	59.86
HORVU6Hr1G010050.1	Barley	plastid	62.44	59.86
Zm00001d054014_P002	Maize	cytosol, plastid	61.48	59.77
Os02t0118200-01	Rice	plasma membrane	61.0	59.72
TraesCSU01G111800.1	Wheat	plastid	62.2	59.63
TraesCS7B01G473700.1	Wheat	plastid	58.61	59.47
TraesCS2D01G038200.1	Wheat	cytosol	55.26	59.38
GSMUA_Achr1P18020_001	Banana	plastid	60.77	59.21
GSMUA_Achr3P26960_001	Banana	plastid	53.59	58.79
TraesCSU01G105900.1	Wheat	plastid	58.13	58.41
TraesCS7A01G550300.1	Wheat	plastid	57.89	58.17
EER95575	Sorghum	cytosol	53.83	57.69
Zm00001d015012_P001	Maize	plastid	61.96	57.17
Zm00001d014850_P002	Maize	plastid	55.74	56.42
EER90433	Sorghum	plastid	56.46	56.32
TraesCS2A01G039600.1	Wheat	cytosol	56.7	56.16
Zm00001d048342_P001	Maize	plastid	53.35	54.66
Zm00001d026126_P001	Maize	plastid	59.33	54.39
TraesCS6D01G235300.1	Wheat	cytosol	56.94	54.34
TraesCS2B01G422500.1	Wheat	cytosol	58.85	54.3
TraesCS2D01G401500.2	Wheat	cytosol	58.85	53.83
TraesCS2A01G404600.1	Wheat	cytosol	58.85	53.83
KXG26902	Sorghum	cytosol	59.09	53.58
Os04t0563900-00	Rice	plasma membrane	60.29	53.05
HORVU6Hr1G064690.4	Barley	cytosol	57.42	52.63
PGSC0003DMT400011261	Potato	plastid	50.48	52.62
Os02t0670100-00	Rice	cytosol, plasma membrane	58.13	52.6
GSMUA_Achr2P11330_001	Banana	cytosol	43.78	52.59
HORVU6Hr1G009900.9	Barley	mitochondrion	42.11	52.54
TraesCS6A01G253700.1	Wheat	cytosol	56.7	52.32
PGSC0003DMT400025864	Potato	plastid	51.67	51.8
Zm00001d051424_P001	Maize	plastid	54.78	51.35
TraesCS6B01G271700.1	Wheat	cytosol	56.46	51.3
TraesCS6A01G051600.1	Wheat	cytosol	45.93	51.2
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	51.2	51.07
EES05745	Sorghum	cytosol	57.66	50.95
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	45.45	50.67
PGSC0003DMT400071329	Potato	plastid	47.37	50.25
Zm00001d027509_P002	Maize	cytosol	44.98	50.13
TraesCS2B01G052500.1	Wheat	cytosol	54.78	49.57
TraesCS6B01G069300.1	Wheat	cytosol	44.5	49.47
PGSC0003DMT400095910	Potato	cytosol	38.76	49.24
PGSC0003DMT400002280	Potato	plastid	49.28	49.16
TraesCSU01G110700.2	Wheat	cytosol	44.02	48.94
HORVU7Hr1G121690.5	Barley	plastid	57.89	48.69
PGSC0003DMT400028591	Potato	plastid	48.09	48.67
PGSC0003DMT400023009	Potato	cytosol, plastid	48.09	48.32
PGSC0003DMT400065801	Potato	plastid	48.33	48.1
PGSC0003DMT400003582	Potato	cytosol	39.71	46.76
PGSC0003DMT400082362	Potato	plastid	44.26	46.72
PGSC0003DMT400045429	Potato	cytosol	47.37	41.51
PGSC0003DMT400002229	Potato	cytosol	47.37	41.08
PGSC0003DMT400079361	Potato	cytosol	43.3	37.79
PGSC0003DMT400049853	Potato	plasma membrane	42.34	36.72

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102598033	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1B6A1	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400014678	PGSC:PGSC0003DMG400014678	EnsemblPlants:PGSC0003DMT400038068
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF103
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295ED88
RefSeq:XP_006364355.1	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase cx32 [Source:PGSC_GENE;Acc:PGSC0003DMG400014678]

Coordinates

chr1:-:88351126..88353936

Molecular Weight (calculated)

46110.6 Da

IEP (calculated)

9.740

GRAVY (calculated)

-0.451

Length

418 amino acids

Sequence
(BLAST)

001: MGVCFSSNNQ SPSTTAHFSS GISQTTSNTT SSSTVSNVSG NSQFSAASGG GVDEVYPNGG QILPHPNLRT FSFTELKTAT RNFRSDTVLG EGGFGKVYKG
101: WLDDRASSRT ASGTGTVIAV KKLNSESLQG LEEWQCEVNF LGTLSHPNLV KLLGYCWEDK ELLLVYEFMQ KGSLENHLFG RGSAVQPLPW NIRLQIVIGA
201: ARGLAFLHAS EKQVIYRDFK ASNILLDGSY NAKISDFGLA KLGPSASQSH VTTRVMGTYG YAAPEYVQTG HLYVKSDVYG FGVVLVEMLT ALRALDTNRP
301: SNQHNLVEWI KPHLSDRRKL KDKMDSRLEG RYPSRAAVQI AQLALSCLGP EPKTRPGMKE VVEKLEQIEA ANERPKEPRI TSRHQTAYRY GQPPLHHRSP
401: LHPRNDVNRA YPLPRRAS

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.